RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 IGHV3OR16-12A0A075B7B8 117 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 A0A087X0K7 114 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 ZNF815PA8K554 130 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 TRGV3P03979 118 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 CCL3L1P16619 93 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 PSMB11A5LHX3 300 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 PAX1P15863 534 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 APOBEC3AP31941 199 aaPredicted RBP13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 Q0VG73 95 aa13.61□□□□□ -0.23
SNAPC4-201ENST00000298532 F2Z2F3 143 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 TMEM42Q69YG0 159 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 NEU4Q8WWR8 484 aaPredicted RBP13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 GAGE12BA1L429 117 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 FAM71F2Q6NXP2 309 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 BMPERQ8N8U9 685 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 NUP35Q8NFH5 326 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 CHTOPQ9Y3Y2 248 aaKnown RBP13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 TMEM95Q3KNT9 176 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 PPP1R27Q86WC6 154 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 DOCK6Q96HP0 2047 aa13.6□□□□□ -0.23
SNAPC4-201ENST00000298532 ESDP10768 282 aa13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 PSG1P11464 419 aa13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 CEP250Q9BV73 2442 aa13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 IGKV3-20P01619 116 aa13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 RPRMLQ8N4K4 120 aa13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 ARHGEF17Q96PE2 2063 aaPredicted RBP13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 JMJD8Q96S16 334 aa13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 ZSWIM8A7E2V4 1837 aa13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 KLHDC3Q9BQ90 382 aa13.59□□□□□ -0.23
SNAPC4-201ENST00000298532 IGHV3OR16-8A0A075B7F1 116 aa13.58□□□□□ -0.23
SNAPC4-201ENST00000298532 FOXH1O75593 365 aa13.58□□□□□ -0.23
SNAPC4-201ENST00000298532 TFF1P04155 84 aa13.58□□□□□ -0.23
SNAPC4-201ENST00000298532 FHL1Q13642 323 aa13.58□□□□□ -0.23
SNAPC4-201ENST00000298532 C5orf63A6NC05 138 aa13.58□□□□□ -0.24
SNAPC4-201ENST00000298532 FAM27E3Q08E93 113 aa13.58□□□□□ -0.24
SNAPC4-201ENST00000298532 C17orf100A8MU93 164 aa13.58□□□□□ -0.24
SNAPC4-201ENST00000298532 OR10W1Q8NGF6 305 aa13.58□□□□□ -0.24
SNAPC4-201ENST00000298532 FNDC1Q4ZHG4 1894 aaPredicted RBP13.58□□□□□ -0.24
SNAPC4-201ENST00000298532 NBR2O15453 112 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 DMRTC2Q8IXT2 367 aaPredicted RBP13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 KIR3DL3Q8N743 410 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 A0A0G2JRQ6 117 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 GAGE2BQ13066 116 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 GAGE2EQ4V326 116 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 DUX5Q96PT3 197 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 GAGE2DQ9UEU5 116 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 LINC01549A6NIU2 74 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 D6R8Y8 96 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 TCRAP04437 139 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 EVI2AP22794 236 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 TRAV8-4A0A0B4J246 113 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 IGHV4-39P01824 125 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 NTF4P34130 210 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 CKS1BP61024 79 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 LY6EQ16553 131 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 AKAP6Q13023 2319 aa13.57□□□□□ -0.24
SNAPC4-201ENST00000298532 EP300Q09472 2414 aaPredicted RBP13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 IFI27P40305 119 aaPredicted RBP13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 KIR3DS1Q14943 382 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 GTSCR1Q86UQ5 136 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 DMRTA2Q96SC8 542 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 IGKV3OR2-268A0A0C4DH90 116 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 C15orf62A8K5M9 175 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 PSPNO60542 156 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 ZFAND6Q6FIF0 208 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 CLEC19AQ6UXS0 136 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 Q6ZRM9 215 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 CLPSP04118 112 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 RNASE4P34096 147 aaKnown RBP13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 PAX2Q02962 417 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 TMEM133Q9H2Q1 129 aa13.56□□□□□ -0.24
SNAPC4-201ENST00000298532 IL18BPO95998 194 aa13.55□□□□□ -0.24
SNAPC4-201ENST00000298532 TMEM101Q96IK0 257 aa13.55□□□□□ -0.24
SNAPC4-201ENST00000298532 RPUSD1Q9UJJ7 312 aaKnown RBP13.55□□□□□ -0.24
SNAPC4-201ENST00000298532 PLNP26678 52 aa13.55□□□□□ -0.24
SNAPC4-201ENST00000298532 PLA2G2CQ5R387 149 aa13.55□□□□□ -0.24
SNAPC4-201ENST00000298532 GTSF1LQ9H1H1 148 aa13.55□□□□□ -0.24
SNAPC4-201ENST00000298532 ASCL4Q6XD76 172 aa13.55□□□□□ -0.24
SNAPC4-201ENST00000298532 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
SNAPC4-201ENST00000298532 TRAV21A0A0B4J279 112 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 LAGE3Q14657 143 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 YAE1D1Q9NRH1 226 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 ANAPC10Q9UM13 185 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 GVINP1Q7Z2Y8 2422 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 TRAV2A0A0B4J234 112 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 SRRM5B3KS81 715 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 KLF17Q5JT82 389 aaPredicted RBP13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 C5orf24Q7Z6I8 188 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 RNF182Q8N6D2 247 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 CDKN1AP38936 164 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 C9orf106Q8NAJ2 232 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 ZNF581Q9P0T4 197 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 SELENOKQ9Y6D0 94 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 MED12Q93074 2177 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 MESP1Q9BRJ9 268 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 THADAQ6YHU6 1953 aa13.54□□□□□ -0.24
SNAPC4-201ENST00000298532 CNTFRP26992 372 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 GGNQ86UU5 652 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 ERG28Q9UKR5 140 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 TRBV7-9A0A0J9YWB2 115 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms