RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 A0A087WWL8 130 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 TCRBV4S1A1TA0A5B7 111 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 OSR1Q8TAX0 266 aaPredicted RBP12.72□□□□□ -0.37
FNDC1-201ENST00000297267 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
FNDC1-201ENST00000297267 LOXL4Q96JB6 756 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 RPRMLQ8N4K4 120 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 THBDP07204 575 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 CD28P10747 220 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 PAX2Q02962 417 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 FANCMQ8IYD8 2048 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 KIAA2026Q5HYC2 2103 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 COL8A2P25067 703 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 SPACA3Q8IXA5 215 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 DPH3P1Q9H4G8 78 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 TMEM170AQ8WVE7 144 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 PRTN3P24158 256 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 TREML4Q6UXN2 200 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 SIGLEC15Q6ZMC9 328 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 ST20Q9HBF5 79 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 OTORQ9NRC9 128 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 LAMTOR2Q9Y2Q5 125 aa12.71□□□□□ -0.37
FNDC1-201ENST00000297267 IFNL4K9M1U5 179 aa12.71□□□□□ -0.38
FNDC1-201ENST00000297267 CSRP2Q16527 193 aa12.71□□□□□ -0.38
FNDC1-201ENST00000297267 IGHV2-26A0A0B4J1V2 119 aa12.71□□□□□ -0.38
FNDC1-201ENST00000297267 TM4SF5O14894 197 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 HIST1H2BLQ99880 126 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 FCN3O75636 299 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 ACTL10Q5JWF8 245 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
FNDC1-201ENST00000297267 PNRC2Q9NPJ4 139 aaKnown RBP12.7□□□□□ -0.38
FNDC1-201ENST00000297267 A0A0G2JNJ9 132 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 TMEM167AQ8TBQ9 72 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 Q9UFV3 132 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 VENTXO95231 258 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 PRSS57Q6UWY2 283 aa12.7□□□□□ -0.38
FNDC1-201ENST00000297267 NTF4P34130 210 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 HEPN1Q6WQI6 88 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 CABIN1Q9Y6J0 2220 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 LYZL1Q6UWQ5 148 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 ZNF815PA8K554 130 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 PSG1P11464 419 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 C15orf32Q32M92 178 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 VCX2Q9H322 139 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
FNDC1-201ENST00000297267 IGHV3-16A0A0C4DH30 117 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 IL18BPO95998 194 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 SDK2Q58EX2 2172 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 KMT2EQ8IZD2 1858 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 TMEM250H0YL14 139 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 YPEL1O60688 119 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 IGKV1-5P01602 117 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 HBDP02042 147 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 YPEL2Q96QA6 119 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 TRGV4A0A0C4DH28 118 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 AMBPP02760 352 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 CD59P13987 128 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 WDR81Q562E7 1941 aa12.68□□□□□ -0.38
FNDC1-201ENST00000297267 SAP30O75446 220 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 IGKCP01834 107 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 PRB1P04280 392 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 PET117Q6UWS5 81 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 IL17RELQ6ZVW7 336 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 ZNF688P0C7X2 276 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 CKS1BP61024 79 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 ERVK11-1P61568 191 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 WNT2P09544 360 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 MEF2CQ06413 473 aaPredicted RBP12.67□□□□□ -0.38
FNDC1-201ENST00000297267 HOXA3O43365 443 aaPredicted RBP12.67□□□□□ -0.38
FNDC1-201ENST00000297267 ZNF672Q499Z4 452 aaPredicted RBP12.67□□□□□ -0.38
FNDC1-201ENST00000297267 ZNF524Q96C55 264 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 GGTLC1Q9BX51 225 aa12.67□□□□□ -0.38
FNDC1-201ENST00000297267 SH2D1AO60880 128 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 OR4X2Q8NGF9 303 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 TRAV26-2A0A0B4J265 109 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 TMEM8BA6NDV4 472 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 CFAP161Q6P656 301 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.66□□□□□ -0.38
FNDC1-201ENST00000297267 IGKV1-16P04430 117 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 HIST3H2BBQ8N257 126 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 REG4Q9BYZ8 158 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 SIP14410 1827 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 FABP5P3A8MUU1 101 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 PAX8Q06710 450 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 FNDC1Q4ZHG4 1894 aaPredicted RBP12.66□□□□□ -0.38
FNDC1-201ENST00000297267 ADCYAP1P18509 176 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 CRYGSP22914 178 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 TMEM144Q7Z5S9 345 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 GATD1Q8NB37 220 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
FNDC1-201ENST00000297267 IGHV1-3A0A0C4DH29 117 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 LINC00158P58513 81 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 NUP35Q8NFH5 326 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 DOCK11Q5JSL3 2073 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 COLCA2A8K830 154 aa12.65□□□□□ -0.38
FNDC1-201ENST00000297267 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.38
FNDC1-201ENST00000297267 SMAGPQ0VAQ4 97 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms