RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 NRN1Q9NPD7 142 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 A0A1B0GV72 72 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 H3BUX3 64 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 IGHV1-8P0DP01 117 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 PRR30Q53SZ7 412 aaPredicted RBP15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 PHF3Q92576 2039 aaKnown RBP15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 A8MXK9 166 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 IGHV4-39P01824 125 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 TMEM95Q3KNT9 176 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 NBASA2RRP1 2371 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 NCR2O95944 276 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 SRSF7Q16629 238 aaKnown RBP eCLIP15.39■□□□□ 0.053e-6■□□□□ 8.2
SMARCC1-201ENST00000254480 BEND2Q8NDZ0 799 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 LTBP1Q14766 1721 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 A0A1B0GWB2 263 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 ZNRD1Q9P1U0 126 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 ZNF257Q9Y2Q1 563 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 TMEM178BH3BS89 294 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 LYPD2Q6UXB3 125 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 IGHV1-3A0A0C4DH29 117 aa15.39■□□□□ 0.05
SMARCC1-201ENST00000254480 TREML4Q6UXN2 200 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 SRRM5B3KS81 715 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 TIMP3P35625 211 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 SLC50A1Q9BRV3 221 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 ZNF688P0C7X2 276 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 PSG1P11464 419 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 COL8A2P25067 703 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 ID3Q02535 119 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 SLC25A15Q9Y619 301 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 DEFB121Q5J5C9 76 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 SEPSECSQ9HD40 501 aaKnown RBP15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 RPUSD1Q9UJJ7 312 aaKnown RBP15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 TRAV21A0A0B4J279 112 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 GAS1P54826 345 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 GTSCR1Q86UQ5 136 aa15.38■□□□□ 0.05
SMARCC1-201ENST00000254480 FOXL1Q12952 345 aa15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 IFI27P40305 119 aaPredicted RBP15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 MBNL3Q9NUK0 354 aaKnown RBP15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 ERVK11-1P61568 191 aa15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 CHCHD5Q9BSY4 110 aa15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 FAM169BQ8N8A8 192 aa15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 TRAV2A0A0B4J234 112 aa15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 DMRTC2Q8IXT2 367 aaPredicted RBP15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 Q8TAT8 98 aa15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 DERL1Q9BUN8 251 aa15.37■□□□□ 0.05
SMARCC1-201ENST00000254480 CD28P10747 220 aa15.36■□□□□ 0.05
SMARCC1-201ENST00000254480 PEF1Q9UBV8 284 aaKnown RBP15.36■□□□□ 0.05
SMARCC1-201ENST00000254480 EFNA4P52798 201 aa15.36■□□□□ 0.05
SMARCC1-201ENST00000254480 UNQ6494/PRO21346Q6UXR6 183 aa15.35■□□□□ 0.05
SMARCC1-201ENST00000254480 NHP2Q9NX24 153 aaKnown RBP15.35■□□□□ 0.05
SMARCC1-201ENST00000254480 MLANAQ16655 118 aa15.35■□□□□ 0.05
SMARCC1-201ENST00000254480 TPTE2P1Q5T6R2 138 aa15.35■□□□□ 0.05
SMARCC1-201ENST00000254480 DPH3P1Q9H4G8 78 aa15.35■□□□□ 0.05
SMARCC1-201ENST00000254480 PNRC2Q9NPJ4 139 aaKnown RBP15.35■□□□□ 0.05
SMARCC1-201ENST00000254480 H3BUT2 72 aa15.35■□□□□ 0.05
SMARCC1-201ENST00000254480 A0A0G2JMZ2 1700 aa15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 LRRC37A2A6NM11 1700 aa15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 UBE2E2Q96LR5 201 aa15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 GGTLC1Q9BX51 225 aa15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 LSM4Q9Y4Z0 139 aaKnown RBP15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 ACTL10Q5JWF8 245 aa15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 LINC00473A8K010 186 aa15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 Q6AWC8 147 aa15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 FCN3O75636 299 aa15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 SUPT4H1P63272 117 aaKnown RBP15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 CD300EQ496F6 205 aaPredicted RBP15.34■□□□□ 0.05
SMARCC1-201ENST00000254480 PKDREJQ9NTG1 2253 aa15.33■□□□□ 0.05
SMARCC1-201ENST00000254480 SLC25A39Q9BZJ4 359 aaPredicted RBP15.33■□□□□ 0.05
SMARCC1-201ENST00000254480 GSN-AS1Q9NRJ2 163 aa15.33■□□□□ 0.05
SMARCC1-201ENST00000254480 WDR83OSQ9Y284 106 aa15.33■□□□□ 0.05
SMARCC1-201ENST00000254480 SPCS1Q9Y6A9 102 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 ZNF474Q6S9Z5 364 aaPredicted RBP15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 RPRMLQ8N4K4 120 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 MGST2Q99735 147 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 BPESC1Q9GZL8 116 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 PRDM13Q9H4Q3 707 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 CRIM1Q9NZV1 1036 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 FBLN5Q9UBX5 448 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 A0A087WWC5 75 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 HEPN1Q6WQI6 88 aa15.33■□□□□ 0.04
SMARCC1-201ENST00000254480 ABCA4P78363 2273 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 DUSP14O95147 198 aaKnown RBP15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 IGKV1-5P01602 117 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 TMEM249Q2WGJ8 235 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 MDS2Q8NDY4 140 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 FNDC4Q9H6D8 234 aaPredicted RBP15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 NIT1Q86X76 327 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 OR9G4Q8NGQ1 327 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 GAFA1Q96PS6 74 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 YLPM1P49750 1951 aaKnown RBP15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 SRSF1Q07955 248 aaKnown RBP eCLIP15.32■□□□□ 0.043e-6■□□□□ 9.3
SMARCC1-201ENST00000254480 RUSC1-AS1Q66K80 236 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 BMPERQ8N8U9 685 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 TCRAP04437 139 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 C10orf126Q8N4M7 172 aa15.32■□□□□ 0.04
SMARCC1-201ENST00000254480 A0A1W2PRE2 83 aa15.31■□□□□ 0.04
SMARCC1-201ENST00000254480 CRPP02741 224 aa15.31■□□□□ 0.04
SMARCC1-201ENST00000254480 USF3Q68DE3 2245 aa15.31■□□□□ 0.04
SMARCC1-201ENST00000254480 LRRK1Q38SD2 2015 aa15.31■□□□□ 0.04
SMARCC1-201ENST00000254480 SPTAN1Q13813 2472 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms