RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 CEACAM8P31997 349 aaPredicted RBP13.65□□□□□ -0.22
SGPP1-201ENST00000247225 EXOC3-AS1Q8N2X6 119 aa13.65□□□□□ -0.22
SGPP1-201ENST00000247225 ZNF430Q9H8G1 570 aaPredicted RBP13.65□□□□□ -0.22
SGPP1-201ENST00000247225 TRAV17A0A0B4J275 112 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 A0A1W2PRE2 83 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 TNFSF4P23510 183 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 COL8A1P27658 744 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 TMEM249Q2WGJ8 235 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 TMEM116Q8NCL8 245 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 FAM167A-AS1Q96KT0 104 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 GAFA1Q96PS6 74 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 SMIM27A0A1W2PRY6 76 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 DLL1O00548 723 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 LEPROTL1O95214 131 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 WFDC3Q8IUB2 231 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 LOXL4Q96JB6 756 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 VPS25Q9BRG1 176 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 RALYQ9UKM9 306 aaKnown RBP13.64□□□□□ -0.23
SGPP1-201ENST00000247225 HSBP1L1C9JCN9 74 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 CNTFRP26992 372 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 BPIFB3P59826 476 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 ADTRPQ96IZ2 230 aa13.64□□□□□ -0.23
SGPP1-201ENST00000247225 TRAV9-1A0A075B6T8 112 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 TRAV9-2A0A087WT02 112 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 NBEAP1P0C6P0 100 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 HIST1H1EP10412 219 aaKnown RBP13.63□□□□□ -0.23
SGPP1-201ENST00000247225 COX7A1P24310 79 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 CTRLP40313 264 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
SGPP1-201ENST00000247225 GOLT1AQ6ZVE7 132 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 ASCL3Q9NQ33 180 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 LRBAP50851 2863 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 A0A087X0K7 114 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 IGF2BP2-AS1Q96M15 143 aa13.63□□□□□ -0.23
SGPP1-201ENST00000247225 IGHV3OR16-8A0A075B7F1 116 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 FAM90A9PA6NNJ1 464 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 HTR1DP28221 377 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 LYPD2Q6UXB3 125 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 ALKBH7Q9BT30 221 aaPredicted RBP13.62□□□□□ -0.23
SGPP1-201ENST00000247225 TMEM70Q9BUB7 260 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 RPUSD1Q9UJJ7 312 aaKnown RBP13.62□□□□□ -0.23
SGPP1-201ENST00000247225 GRAMD2BQ96HH9 432 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 DKK4Q9UBT3 224 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 LYNX1G3V0Z9 82 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 LYNX1P0DP58 116 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 ESDP10768 282 aa13.62□□□□□ -0.23
SGPP1-201ENST00000247225 LINC00614P0C842 121 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 GLRXP35754 106 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 EPDR1Q9UM22 224 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 ZNF257Q9Y2Q1 563 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 MUC15Q8N387 334 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 OR1L4Q8NGR5 311 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 PLSCR4Q9NRQ2 329 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 ASH1LQ9NR48 2969 aaKnown RBP13.61□□□□□ -0.23
SGPP1-201ENST00000247225 IGHV3-35A0A0C4DH35 117 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 SP9P0CG40 484 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 C2orf83Q53S99 150 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 SEM1Q6ZVN7 128 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 OR8A1Q8NGG7 326 aa13.61□□□□□ -0.23
SGPP1-201ENST00000247225 TNRC6BQ9UPQ9 1833 aaKnown RBP13.6□□□□□ -0.23
SGPP1-201ENST00000247225 OR2T8A6NH00 312 aa13.6□□□□□ -0.23
SGPP1-201ENST00000247225 ZNF714Q96N38 554 aa13.6□□□□□ -0.23
SGPP1-201ENST00000247225 LY96Q9Y6Y9 160 aa13.6□□□□□ -0.23
SGPP1-201ENST00000247225 KLK10O43240 276 aa13.6□□□□□ -0.23
SGPP1-201ENST00000247225 SUB1P53999 127 aaKnown RBP eCLIP13.6□□□□□ -0.23
SGPP1-201ENST00000247225 FBLN7Q53RD9 439 aa13.6□□□□□ -0.23
SGPP1-201ENST00000247225 SRSF12Q8WXF0 261 aaKnown RBP13.6□□□□□ -0.23
SGPP1-201ENST00000247225 GAGE1Q13065 139 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 FAM222BQ8WU58 562 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 GUCD1Q96NT3 240 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 RAB9BQ9NP90 201 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 NKX6-3A6NJ46 265 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 H0YJW9 148 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 IGLV1-44P01699 117 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 HBBP68871 147 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 TMEM200BQ69YZ2 307 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 SLC25A48Q6ZT89 311 aaKnown RBP13.59□□□□□ -0.23
SGPP1-201ENST00000247225 TEX45Q8NA69 505 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
SGPP1-201ENST00000247225 A0A1W2PPI3 338 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 CNIH1O95406 144 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 LDLRAD2Q5SZI1 272 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 FXYD5Q96DB9 178 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 AKAP13Q12802 2813 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 CGB3P0DN86 165 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 CGB7P0DN87 165 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 AMMECR1LQ6DCA0 310 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 C22orf15Q8WYQ4 148 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 TMUB1Q9BVT8 246 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 Q9H3A6 140 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 NDUFA4L2Q9NRX3 87 aa13.58□□□□□ -0.24
SGPP1-201ENST00000247225 TCRBV4S1A1TA0A5B7 111 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 TMEM11P17152 192 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 GTSF1Q8WW33 167 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 C17orf77Q96MU5 243 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 DYNLRB1Q9NP97 96 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 PSG1P11464 419 aa13.57□□□□□ -0.24
SGPP1-201ENST00000247225 UBE2V1Q13404 147 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms