RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Gm21858A0A087WQ24 222 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Gm28102A0A087WQL3 222 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Gm21488A0A087WR99 222 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Gm21497A0A087WRK3 222 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Gm21294A0A087WS79 222 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Gm20911A0A087WSS0 222 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Gm28870A0A0A6YW38 222 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Gm29866A0A0A6YX04 222 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Vmn1r68E9Q0V3 319 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Olfr920E9Q413 310 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Olfr521E9Q519 321 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Ascl4M0QW46 144 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Lhfpl5Q4KL25 219 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Ankrd13bQ5F259 626 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Med22Q62276 200 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Parp16Q7TMM8 322 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Olfr1283Q7TQY4 305 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Q80X32 188 aaKnown RBP11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Olfr1301Q8VGE7 312 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 CenpvQ9CXS4 252 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 IcosQ9WVS0 200 aa11.71□□□□□ -0.53
Sf3b6-201ENSMUST00000046207 Gfi1bO70237 330 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Brd7O88665 651 aaKnown RBP11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 CrygdP04342 174 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Hoxb6P09023 224 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Cbx3P23198 183 aaKnown RBP11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Rab11bP46638 218 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 CrygeQ03740 174 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Gm21943Q5FWD5 227 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Ang6Q5GAN0 147 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Foxc2Q61850 494 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Sqstm1Q64337 442 aaKnown RBP11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 MffQ6PCP5 291 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Smim12Q78RX3 92 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Sec22aQ8BH47 307 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 DpcdQ8BPA8 203 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Zfp459Q8BZ17 267 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Klre1Q8CJC7 226 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Olfr802Q8VGJ2 312 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 NepnQ9CQ76 512 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Magt1Q9CQY5 335 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Dram2Q9CR48 267 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Atp23Q9CWQ3 201 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Dmac2Q9D7K5 258 aaKnown RBP11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Spcs1Q9D958 161 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Ovol1Q9WTJ2 267 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Cxcl14Q9WUQ5 99 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Pf4Q9Z126 105 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Gm17087V9GXQ2 156 aa11.7□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Olfr191L7N1Z8 309 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 DhodhO35435 395 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Galr1P56479 348 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 ClcP97400 68 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Npy4rQ61041 375 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Minos1Q7TNS2 76 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Olfr1368Q8VFG3 314 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Hnrnpa0Q9CX86 305 aaKnown RBP11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Wdr4Q9EP82 413 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Klk4Q9Z0M1 255 aa11.69□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Ighv5-6A0A075B5Q0 117 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Cnih1O35372 144 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Ca11O70354 328 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Slc25a17O70579 307 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Mtnd4P03911 459 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Ifna7P06799 190 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Cdk1P11440 297 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Cdx1P18111 268 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Psmb9P28076 219 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Hsd11b2P51661 386 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 GferP56213 198 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Rps25P62852 125 aaKnown RBP11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 CpeQ00493 476 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Rnf152Q8BG47 203 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Tspan14Q8QZY6 270 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 AY074887Q8R5F9 132 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Olfr1141Q8VFQ7 311 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Olfr473Q8VG44 310 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Chmp1aQ921W0 196 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Bcl3Q9Z2F6 448 aa11.68□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Gm9972E9Q053 102 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Olfr427E9Q7E7 315 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 G530012D18RikJ3QK25 139 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Cd28P31041 218 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Rab22aP35285 194 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 OsmP53347 263 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 SlbpP97440 275 aaKnown RBP11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 AcadsQ07417 412 aaKnown RBP11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Syce1lQ5D525 247 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Ifna15Q61718 190 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Glt8d1Q6NSU3 371 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Slc35d2Q762D5 326 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Olfr112Q8C0S2 320 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 4930451G09RikQ8C5G4 195 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Degs2Q8R2F2 323 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 RpeQ8VEE0 228 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Olfr52Q8VFL0 319 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Acaa1aQ921H8 424 aaKnown RBP11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Mrm2Q9CPY0 246 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Ift27Q9D0P8 186 aa11.67□□□□□ -0.54
Sf3b6-201ENSMUST00000046207 Tctex1d1Q9D5I4 173 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 83.2 ms