RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 UNC79Q9P2D8 2635 aa7.03□□□□□ -1.28
CCDC47-207ENST00000612558 IGKV1D-37A0A075B6S9 117 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 TCRBV4S1A1TA0A5B7 111 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 A6NDX4 124 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 RBFOX3A6NFN3 312 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 ZFP92A6NM28 416 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 M0QZK8 103 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 FSHBP01225 129 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 IGHV3-48P01763 117 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 ITPR2Q14571 2701 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 C16orf82Q7Z2V1 217 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 TMEM219Q86XT9 240 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 OR4X1Q8NH49 305 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 TRGV9Q99603 122 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 C19orf24Q9BVV8 132 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 THYN1Q9P016 225 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 CSMD1Q96PZ7 3565 aa7.02□□□□□ -1.29
CCDC47-207ENST00000612558 ZANQ9Y493 2812 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 IGLV11-55A0A075B6I3 123 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 IGHV3-21A0A0B4J1V1 117 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 K7EIM0 57 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 ATP6V0E1O15342 81 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 HMGB3O15347 200 aaKnown RBP7.01□□□□□ -1.29
CCDC47-207ENST00000612558 IFNA1P01562 189 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 AMY1AP04745 511 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 GATA2P23769 480 aaPredicted RBP7.01□□□□□ -1.29
CCDC47-207ENST00000612558 RHOBP62745 196 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 LY6EQ16553 131 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 HAGHQ16775 308 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 AKIRIN2Q53H80 203 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 ZNF506Q5JVG8 444 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 C10orf91Q5T1B1 145 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 UNQ5815/PRO19632Q6UWF5 114 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 RBMS3Q6XE24 437 aaKnown RBP7.01□□□□□ -1.29
CCDC47-207ENST00000612558 C9orf139Q6ZV77 190 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 OR5T1Q8NG75 326 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 FANCD2OSQ96PS1 177 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 RARRES2Q99969 163 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 SEC11CQ9BY50 192 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 TNFRSF19Q9NS68 423 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 ITPR3Q14573 2671 aa7.01□□□□□ -1.29
CCDC47-207ENST00000612558 C9JQL5 133 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 F8W036 122 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 EIF3GO75821 320 aaKnown RBP eCLIP7□□□□□ -1.29
CCDC47-207ENST00000612558 APOC3P02656 99 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 HSPB1P04792 205 aaKnown RBP7□□□□□ -1.29
CCDC47-207ENST00000612558 SFTA3P0C7M3 94 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 STAG3L2P0CL84 134 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 STAG3L3P0CL85 134 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 HIST1H1BP16401 226 aaKnown RBP7□□□□□ -1.29
CCDC47-207ENST00000612558 ZNF90Q03938 601 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 KLK9Q2XQG4 91 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 DEFB112Q30KQ8 113 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 KHDC3LQ587J8 217 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 SLC35E3Q7Z769 313 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 CCDC28AQ8IWP9 274 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 BCL6BQ8N143 479 aaPredicted RBP7□□□□□ -1.29
CCDC47-207ENST00000612558 FAM110DQ8TAY7 271 aaPredicted RBP7□□□□□ -1.29
CCDC47-207ENST00000612558 GATAD1Q8WUU5 269 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 KRTAP4-2Q9BYR5 136 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 SLC35B3Q9H1N7 401 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 SEPSECSQ9HD40 501 aaKnown RBP7□□□□□ -1.29
CCDC47-207ENST00000612558 KLK9Q9UKQ9 250 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 CELSR1Q9NYQ6 3014 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 TEX15Q9BXT5 2789 aa7□□□□□ -1.29
CCDC47-207ENST00000612558 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 SH2D7A6NKC9 451 aaPredicted RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 LINC01548A6NM66 108 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 EREGO14944 169 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 CLN5O75503 358 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 CXorf1O96002 111 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 BCL2P10415 239 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 ADCYAP1P18509 176 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 TAGLN2P37802 199 aaKnown RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 IER3P46695 156 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 NPBWR1P48145 328 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 PSMB3P49720 205 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 PPT1P50897 306 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 CRIP2P52943 208 aaPredicted RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 ICAM4Q14773 271 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 ECSCRQ19T08 205 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 FAM78BQ5VT40 261 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 CIARTQ8N365 385 aaPredicted RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 TEX29Q8N6K0 151 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 OR1L4Q8NGR5 311 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 OR5R1Q8NH85 324 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 RNF2Q99496 336 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 TMPRSS5Q9H3S3 457 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 DNAJC4Q9NNZ3 241 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 VAX2Q9UIW0 290 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 FUT9Q9Y231 359 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 CARHSP1Q9Y2V2 147 aaKnown RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 ZFHX3Q15911 3703 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 PDZD2O15018 2839 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 TLN2Q9Y4G6 2542 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 ZNF469Q96JG9 3925 aaPredicted RBP6.99□□□□□ -1.29
CCDC47-207ENST00000612558 HECTD1Q9ULT8 2610 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 TRAV30A0A087WSZ9 112 aa6.99□□□□□ -1.29
CCDC47-207ENST00000612558 MDFIC2A0A1B0GVS7 189 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms