RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 CENPSQ8N2Z9 138 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 OR1S2Q8NGQ3 325 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 NPIPB3Q92617 1050 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 OVOL2Q9BRP0 275 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 DNASE2O00115 360 aaPredicted RBP13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 IFNA4P05014 189 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 IAPPP10997 89 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 RBMS2Q15434 407 aaKnown RBP13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 ETFRF1Q6IPR1 90 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 NOXA1Q86UR1 476 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 DEDD2Q8WXF8 326 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 TMEM231Q9H6L2 316 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 PAIP2BQ9ULR5 123 aaKnown RBP13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 U3KQ87 197 aa13.17□□□□□ -0.3
CTDNEP1-207ENST00000572043 HOXB5P09067 269 aa13.16□□□□□ -0.3
CTDNEP1-207ENST00000572043 DEFB135Q30KP9 77 aa13.16□□□□□ -0.3
CTDNEP1-207ENST00000572043 Q8WTZ3 238 aa13.16□□□□□ -0.3
CTDNEP1-207ENST00000572043 SDHCQ99643 169 aaPredicted RBP13.16□□□□□ -0.3
CTDNEP1-207ENST00000572043 RABAC1Q9UI14 185 aa13.16□□□□□ -0.3
CTDNEP1-207ENST00000572043 FLVCR2Q9UPI3 526 aa13.16□□□□□ -0.3
CTDNEP1-207ENST00000572043 DUXBA0A1W2PPF3 345 aa13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 A0A1W2PS18 150 aa13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 P2RY1P47900 373 aa13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 LEMD1Q68G75 181 aa13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 FAM24BQ8N5W8 94 aa13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 STPG3Q8N7X2 389 aa13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 STXBP6Q8NFX7 210 aa13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 NARS2Q96I59 477 aaKnown RBP13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 MAGT1Q9H0U3 335 aa13.15□□□□□ -0.3
CTDNEP1-207ENST00000572043 KMT2CQ8NEZ4 4911 aaKnown RBP13.14□□□□□ -0.31
CTDNEP1-207ENST00000572043 PIGBOS1A0A0B4J2F0 54 aa13.14□□□□□ -0.31
CTDNEP1-207ENST00000572043 PITX3O75364 302 aa13.14□□□□□ -0.31
CTDNEP1-207ENST00000572043 IL4P05112 153 aa13.14□□□□□ -0.31
CTDNEP1-207ENST00000572043 CRYBB3P26998 211 aa13.14□□□□□ -0.31
CTDNEP1-207ENST00000572043 DEFB131AP59861 70 aa13.14□□□□□ -0.31
CTDNEP1-207ENST00000572043 LRTM2Q8N967 370 aa13.14□□□□□ -0.31
CTDNEP1-207ENST00000572043 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 SPRY2O43597 315 aa13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 NDUFB6O95139 128 aa13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 CD5P06127 495 aa13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 HNRNPCP07910 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 CMC4P56277 68 aaPredicted RBP13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 YPEL3P61236 119 aaPredicted RBP13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 USF2Q15853 346 aaPredicted RBP13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 GGNBP1Q5YKI7 109 aa13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 TMED3Q9Y3Q3 217 aa13.13□□□□□ -0.31
CTDNEP1-207ENST00000572043 C9orf170A2RU37 121 aa13.12□□□□□ -0.31
CTDNEP1-207ENST00000572043 ADAP1O75689 374 aa13.12□□□□□ -0.31
CTDNEP1-207ENST00000572043 RD3LP0DJH9 198 aa13.12□□□□□ -0.31
CTDNEP1-207ENST00000572043 IL7P13232 177 aa13.12□□□□□ -0.31
CTDNEP1-207ENST00000572043 GRAMD2BQ96HH9 432 aa13.12□□□□□ -0.31
CTDNEP1-207ENST00000572043 SLC35E1Q96K37 410 aa13.12□□□□□ -0.31
CTDNEP1-207ENST00000572043 KIR2DL5BA0A0G2JN68 375 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 KIR2DL5BA0A0G2JPC4 375 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 ZFP92A6NM28 416 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 CENPXA8MT69 81 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 WRBO00258 174 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 UBE2CO00762 179 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 TOMM40O96008 361 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 PSG1P11464 419 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 SLC25A6P12236 298 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 ANXA7P20073 488 aaKnown RBP13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 Q6ZWC4 215 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 KIR2DL5AQ8N109 375 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 OR51G1Q8NGK1 321 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 KIR2DL5BQ8NHK3 375 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 PBDC1Q9BVG4 233 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 NDUFA13Q9P0J0 144 aa13.11□□□□□ -0.31
CTDNEP1-207ENST00000572043 A0A0J9YWU9 116 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 MPTX1A8MV57 137 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 MED6O75586 246 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 BTCP35070 178 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 RAB11AP62491 216 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 ZNF90Q03938 601 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 GAMTQ14353 236 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 CSTL1Q9H114 145 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 U3KQE9 123 aa13.1□□□□□ -0.31
CTDNEP1-207ENST00000572043 TENM3Q9P273 2699 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 FAM90A26D6RGX4 464 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 H3BP45 60 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 K7EQG2 157 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 SYNGR2O43760 224 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 OR4E1P0C645 316 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 GPX4P36969 197 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 ATP5IP56385 69 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 DHRS2Q13268 280 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 C16orf54Q6UWD8 224 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 COQ8AQ8NI60 647 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 IL17DQ8TAD2 202 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 RNF183Q96D59 192 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 TP53TG1Q9Y2A0 90 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 STAB2Q8WWQ8 2551 aa13.09□□□□□ -0.31
CTDNEP1-207ENST00000572043 IGKV1D-37A0A075B6S9 117 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms