RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 IGHV3-48P01763 117 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 CXCL1P09341 107 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 APELAP0DMC3 54 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 SRP14P37108 136 aaKnown RBP10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 SRSF1Q07955 248 aaKnown RBP eCLIP10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 FAM210BQ96KR6 192 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 PAXXQ9BUH6 204 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 DERL1Q9BUN8 251 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 URGCP-MRPS24S4R325 110 aa10.03□□□□□ -0.8
AC055717.2-201ENST00000561864 TNCP24821 2201 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 K7EIM0 57 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 HYPMO75409 117 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 IGLC1P0CG04 106 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 CD24P25063 80 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 SAA4P35542 130 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 RPS10P46783 165 aaKnown RBP10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 DSCR9P59020 149 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 PAX8Q06710 450 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 LINC00305Q7Z4B0 112 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 TMEM190Q8WZ59 177 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 AJUBAQ96IF1 538 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 BTF3L4Q96K17 158 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 ZNF48Q96MX3 618 aaPredicted RBP10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 IMMP2LQ96T52 175 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 SSX3Q99909 188 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 OR51M1Q9H341 326 aa10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 SAV1Q9H4B6 383 aaPredicted RBP10.02□□□□□ -0.81
AC055717.2-201ENST00000561864 TRAV5A0A0B4J249 113 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 MDFIC2A0A1B0GVS7 189 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 NCBP2LA6PVI3 153 aaKnown RBP10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 GGTLC3B5MD39 225 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 HLA-DRB1P01911 266 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 PFN1P07737 140 aaKnown RBP10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 RNF224P0DH78 156 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 PAX1P15863 534 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 GALR1P47211 349 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 ATP5J2P56134 94 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 CX3CL1P78423 397 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 FBLN7Q53RD9 439 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 MORN5Q5VZ52 161 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 KCNIP4Q6PIL6 250 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 TTC9CQ8N5M4 171 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 OR1B1Q8NGR6 318 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 C2CD4CQ8TF44 421 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 RASL11BQ9BPW5 248 aa10.01□□□□□ -0.81
AC055717.2-201ENST00000561864 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 IGLV11-55A0A075B6I3 123 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 TRAV30A0A087WSZ9 112 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 IGHV4-61A0A0C4DH41 118 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 S100A6P06703 90 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 OR10J4P0C629 311 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 ORM2P19652 201 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 SMUG1Q53HV7 270 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 ASPHD1Q5U4P2 390 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 RUSC1-AS1Q66K80 236 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 Q8N9W7 124 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 FXYD5Q96DB9 178 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 SFRP2Q96HF1 295 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 RBM14Q96PK6 669 aaKnown RBP10□□□□□ -0.81
AC055717.2-201ENST00000561864 HIGD1AQ9Y241 93 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 ABCA4P78363 2273 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 RELNP78509 3460 aa10□□□□□ -0.81
AC055717.2-201ENST00000561864 IGHV3-21A0A0B4J1V1 117 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 CENPVL3A0A0U1RRI6 287 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 C5orf52A6NGY3 159 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 GGCTO75223 188 aaKnown RBP9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 SCGB2A1O75556 95 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 TOMM40O96008 361 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 RPL35P42766 123 aaKnown RBP9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 NDPQ00604 133 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 TIGITQ495A1 244 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 SRD5A3Q9H8P0 318 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 THYN1Q9P016 225 aa9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 UBR5O95071 2799 aaPredicted RBP9.99□□□□□ -0.81
AC055717.2-201ENST00000561864 IGHV7-81A0A0B4J1V7 117 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 IGHV1-69DA0A0B4J2H0 117 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 HELTA6NFD8 242 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 UBE2CO00762 179 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 IGKV1-17P01599 117 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 IGHV1-69P01742 117 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 RD3LP0DJH9 198 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 PYYP10082 97 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 PSG1P11464 419 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 GP9P14770 177 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 COX6B1P14854 86 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 HIST1H1BP16401 226 aaKnown RBP9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 CRYBB3P26998 211 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 GNG4P50150 75 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 TAS2R60P59551 318 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 YPEL3P61236 119 aaPredicted RBP9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 SUMO1P63165 101 aaKnown RBP9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 KLK9Q2XQG4 91 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 CENPWQ5EE01 88 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 TEX38Q6PEX7 206 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 S100A7AQ86SG5 101 aa9.98□□□□□ -0.81
AC055717.2-201ENST00000561864 ZNF329Q86UD4 541 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms