RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 SULT1A1P50225 295 aa0.53□□□□□ -2.32
LINC00871-202ENST00000556071 NKX2-5P52952 324 aaPredicted RBP0.53□□□□□ -2.32
LINC00871-202ENST00000556071 LINC01554Q52M75 96 aa0.53□□□□□ -2.32
LINC00871-202ENST00000556071 TRAPPC6BQ86SZ2 158 aa0.53□□□□□ -2.32
LINC00871-202ENST00000556071 CLECL1Q8IZS7 167 aa0.53□□□□□ -2.32
LINC00871-202ENST00000556071 C20orf27Q9GZN8 174 aa0.53□□□□□ -2.32
LINC00871-202ENST00000556071 CHD3Q12873 2000 aaKnown RBP0.53□□□□□ -2.32
LINC00871-202ENST00000556071 TRAV26-2A0A0B4J265 109 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 CHP2O43745 196 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 SMIM10L2AP0DMW4 78 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 SMIM10L2BP0DMW5 78 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 CCDC122Q5T0U0 273 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 SPATA8Q6RVD6 105 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 DCSTAMPQ9H295 470 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 OR51V1Q9H2C8 321 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 EPDR1Q9UM22 224 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 MYO18AQ92614 2054 aaKnown RBP0.52□□□□□ -2.33
LINC00871-202ENST00000556071 UNC13CQ8NB66 2214 aa0.52□□□□□ -2.33
LINC00871-202ENST00000556071 S100A4P26447 101 aaKnown RBP0.51□□□□□ -2.33
LINC00871-202ENST00000556071 SPRNQ5BIV9 151 aa0.51□□□□□ -2.33
LINC00871-202ENST00000556071 NAV3Q8IVL0 2385 aa0.51□□□□□ -2.33
LINC00871-202ENST00000556071 NHP2Q9NX24 153 aaKnown RBP0.51□□□□□ -2.33
LINC00871-202ENST00000556071 V9GYY5 206 aaPredicted RBP0.51□□□□□ -2.33
LINC00871-202ENST00000556071 COL1A1P02452 1464 aaPredicted RBP0.5□□□□□ -2.33
LINC00871-202ENST00000556071 APCP25054 2843 aa0.5□□□□□ -2.33
LINC00871-202ENST00000556071 CCL25O15444 150 aa0.5□□□□□ -2.33
LINC00871-202ENST00000556071 C4orf3Q8WVX3 66 aa0.5□□□□□ -2.33
LINC00871-202ENST00000556071 DCUN1D1Q96GG9 259 aa0.5□□□□□ -2.33
LINC00871-202ENST00000556071 CACNA1EQ15878 2313 aa0.5□□□□□ -2.33
LINC00871-202ENST00000556071 FAM236DA0A1B0GTK5 79 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 A0A1W2PPM0 123 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 PIRO00625 290 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 AHSA1O95433 338 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 DNAL4O96015 105 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 IFNA16P05015 189 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 OR4E1P0C645 316 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 FAM236CP0DP71 79 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 EFNA4P52798 201 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 BRMS1LQ5PSV4 323 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 VPS29Q9UBQ0 182 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 NAV2Q8IVL1 2488 aa0.49□□□□□ -2.33
LINC00871-202ENST00000556071 SCN8AQ9UQD0 1980 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 ROBO3Q96MS0 1386 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 TTRP02766 147 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 RBP1P09455 135 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 ESRGQ1W209 222 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 KRT222Q8N1A0 295 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 C8orf76Q96K31 380 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 NEO1Q92859 1461 aa0.48□□□□□ -2.33
LINC00871-202ENST00000556071 YPEL3P61236 119 aaPredicted RBP0.47□□□□□ -2.33
LINC00871-202ENST00000556071 PSG9Q00887 426 aa0.47□□□□□ -2.33
LINC00871-202ENST00000556071 SRSF6Q13247 344 aaKnown RBP0.47□□□□□ -2.33
LINC00871-202ENST00000556071 LINC00301Q8NCQ3 95 aa0.47□□□□□ -2.33
LINC00871-202ENST00000556071 WFDC5Q8TCV5 224 aa0.47□□□□□ -2.33
LINC00871-202ENST00000556071 CCDC90BQ9GZT6 254 aa0.47□□□□□ -2.33
LINC00871-202ENST00000556071 UBAP1Q9NZ09 502 aa0.47□□□□□ -2.33
LINC00871-202ENST00000556071 CYSLTR1Q9Y271 337 aa0.47□□□□□ -2.33
LINC00871-202ENST00000556071 UTP11Q9Y3A2 253 aaKnown RBP0.47□□□□□ -2.33
LINC00871-202ENST00000556071 M0R036 132 aa0.46□□□□□ -2.34
LINC00871-202ENST00000556071 TEX47Q8TBZ9 253 aa0.46□□□□□ -2.34
LINC00871-202ENST00000556071 PATE1Q8WXA2 126 aa0.46□□□□□ -2.34
LINC00871-202ENST00000556071 C6orf62Q9GZU0 229 aaPredicted RBP0.46□□□□□ -2.34
LINC00871-202ENST00000556071 C10orf95Q9H7T3 257 aa0.46□□□□□ -2.34
LINC00871-202ENST00000556071 CITO14578 2027 aa0.46□□□□□ -2.34
LINC00871-202ENST00000556071 ALPK3Q96L96 1907 aa0.45□□□□□ -2.34
LINC00871-202ENST00000556071 A0A087X0T9 212 aa0.45□□□□□ -2.34
LINC00871-202ENST00000556071 C7orf71A4D174 169 aa0.45□□□□□ -2.34
LINC00871-202ENST00000556071 CLDN24A6NM45 220 aa0.45□□□□□ -2.34
LINC00871-202ENST00000556071 SERPINA6P08185 405 aa0.45□□□□□ -2.34
LINC00871-202ENST00000556071 CASP1P29466 404 aa0.45□□□□□ -2.34
LINC00871-202ENST00000556071 GKN2Q86XP6 184 aa0.45□□□□□ -2.34
LINC00871-202ENST00000556071 CLDN22Q8N7P3 220 aa0.45□□□□□ -2.34
LINC00871-202ENST00000556071 ADAT3Q96EY9 351 aaPredicted RBP0.45□□□□□ -2.34
LINC00871-202ENST00000556071 MED1Q15648 1581 aaPredicted RBP0.45□□□□□ -2.34
LINC00871-202ENST00000556071 MYO3BQ8WXR4 1341 aa0.44□□□□□ -2.34
LINC00871-202ENST00000556071 CCL16O15467 120 aa0.44□□□□□ -2.34
LINC00871-202ENST00000556071 CNIH1O95406 144 aa0.44□□□□□ -2.34
LINC00871-202ENST00000556071 TSNQ15631 228 aaKnown RBP0.44□□□□□ -2.34
LINC00871-202ENST00000556071 FAM74A1Q5RGS3 127 aa0.44□□□□□ -2.34
LINC00871-202ENST00000556071 C12orf45Q8N5I9 185 aaPredicted RBP0.44□□□□□ -2.34
LINC00871-202ENST00000556071 OR8D4Q8NGM9 314 aa0.44□□□□□ -2.34
LINC00871-202ENST00000556071 HIST1H2BLQ99880 126 aa0.44□□□□□ -2.34
LINC00871-202ENST00000556071 MYH7BA7E2Y1 1941 aa0.43□□□□□ -2.34
LINC00871-202ENST00000556071 C1orf196B1AJZ1 125 aa0.43□□□□□ -2.34
LINC00871-202ENST00000556071 LCA10Q71F78 164 aa0.43□□□□□ -2.34
LINC00871-202ENST00000556071 BCL2L10Q9HD36 194 aa0.43□□□□□ -2.34
LINC00871-202ENST00000556071 C14orf132Q9NPU4 83 aa0.43□□□□□ -2.34
LINC00871-202ENST00000556071 TRBV6-4A0A1B0GX49 114 aa0.42□□□□□ -2.34
LINC00871-202ENST00000556071 KLF7O75840 302 aaPredicted RBP0.42□□□□□ -2.34
LINC00871-202ENST00000556071 PRH1P02810 166 aa0.42□□□□□ -2.34
LINC00871-202ENST00000556071 IMPG1Q17R60 797 aa0.42□□□□□ -2.34
LINC00871-202ENST00000556071 LINC00322Q6ZN03 302 aaPredicted RBP0.42□□□□□ -2.34
LINC00871-202ENST00000556071 ITFG2Q969R8 447 aa0.42□□□□□ -2.34
LINC00871-202ENST00000556071 PARD6GQ9BYG4 376 aaPredicted RBP0.42□□□□□ -2.34
LINC00871-202ENST00000556071 TLNRD1Q9H1K6 362 aa0.42□□□□□ -2.34
LINC00871-202ENST00000556071 CHCHD2Q9Y6H1 151 aaPredicted RBP0.42□□□□□ -2.34
LINC00871-202ENST00000556071 TET1Q8NFU7 2136 aa0.41□□□□□ -2.34
LINC00871-202ENST00000556071 ZDBF2Q9HCK1 2354 aa0.41□□□□□ -2.34
LINC00871-202ENST00000556071 ZNF682O95780 498 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms