RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 OR5AN1Q8NGI8 311 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 OR2T10Q8NGZ9 312 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 LY96Q9Y6Y9 160 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 ARL14EPLP0DKL9 152 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 AREGP15514 252 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 GNG10P50151 68 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 TMEM177Q53S58 311 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 HIST3H2BBQ8N257 126 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 PIP4P2Q8N4L2 257 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 STPG3Q8N7X2 389 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 VSTM2AQ8TAG5 236 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 CACNG8Q8WXS5 425 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 GSN-AS1Q9NRJ2 163 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 CRLF1O75462 422 aa13.89□□□□□ -0.19
SHOX-204ENST00000554971 GCHFRP30047 84 aa13.89□□□□□ -0.19
SHOX-204ENST00000554971 FOXL1Q12952 345 aa13.89□□□□□ -0.19
SHOX-204ENST00000554971 COA6Q5JTJ3 125 aaKnown RBP13.89□□□□□ -0.19
SHOX-204ENST00000554971 RUSC1-AS1Q66K80 236 aa13.89□□□□□ -0.19
SHOX-204ENST00000554971 C22orf15Q8WYQ4 148 aa13.89□□□□□ -0.19
SHOX-204ENST00000554971 ACY3Q96HD9 319 aa13.89□□□□□ -0.19
SHOX-204ENST00000554971 FBN1P35555 2871 aaKnown RBP13.88□□□□□ -0.19
SHOX-204ENST00000554971 TEX50A0A1B0GTY4 177 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 IFITM10A6NMD0 228 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 GPX4P36969 197 aaPredicted RBP13.88□□□□□ -0.19
SHOX-204ENST00000554971 OR4X1Q8NH49 305 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 UHRF2Q96PU4 802 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 SLC45A2Q9UMX9 530 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 NDUFB4O95168 129 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 LDLRAD2Q5SZI1 272 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 PDPNQ86YL7 162 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 BCL6BQ8N143 479 aaPredicted RBP13.88□□□□□ -0.19
SHOX-204ENST00000554971 C11orf52Q96A22 123 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 TMEM133Q9H2Q1 129 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 TMEM167BQ9NRX6 74 aa13.88□□□□□ -0.19
SHOX-204ENST00000554971 A0A087X0M5 115 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 IGHV1-69DA0A0B4J2H0 117 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 A0A1B0GX30 115 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 A0A1W2PN81 502 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 A0A1W2PRD5 423 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 A0A1W2PRF3 423 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 A0A1W2PRM7 423 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 IGHV1-69P01742 117 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 HNF1AP20823 631 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 COX7A1P24310 79 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 CHRNA7P36544 502 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 ATP5G3P48201 142 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 UBE2E1P51965 193 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 ERHP84090 104 aaKnown RBP13.87□□□□□ -0.19
SHOX-204ENST00000554971 AJUBAQ96IF1 538 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 ZNRD1Q9P1U0 126 aa13.87□□□□□ -0.19
SHOX-204ENST00000554971 TRAV9-1A0A075B6T8 112 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 IGHV2-26A0A0B4J1V2 119 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 SRRM4A7MD48 611 aaKnown RBP13.86□□□□□ -0.19
SHOX-204ENST00000554971 H0YJW9 148 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 IGKV1-16P04430 117 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 LINC00869P0C866 280 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 SAA1P0DJI8 122 aaPredicted RBP13.86□□□□□ -0.19
SHOX-204ENST00000554971 ZNF137PP52743 207 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 UBE2G2P60604 165 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 OR4C13Q8NGP0 309 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 SSMEM1Q8WWF3 244 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 FLYWCH2Q96CP2 140 aaKnown RBP13.86□□□□□ -0.19
SHOX-204ENST00000554971 RNF2Q99496 336 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 NDUFA4L2Q9NRX3 87 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 COL6A5A8TX70 2615 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 ODF3BA8MYP8 253 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 C9JCJ5 164 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 DEFA4P12838 97 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 SRD5A1P18405 259 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 MC5RP33032 325 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 PQLC2Q6ZP29 291 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 TMEM183AQ8IXX5 376 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 OR11H6Q8NGC7 330 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 TMEM167AQ8TBQ9 72 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 HINT2Q9BX68 163 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 COMMD5Q9GZQ3 224 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 TECRQ9NZ01 308 aaKnown RBP13.86□□□□□ -0.19
SHOX-204ENST00000554971 FUT9Q9Y231 359 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 DMRT1Q9Y5R6 373 aa13.86□□□□□ -0.19
SHOX-204ENST00000554971 TAS2R45P59539 299 aa13.85□□□□□ -0.19
SHOX-204ENST00000554971 RPL8P62917 257 aaKnown RBP13.85□□□□□ -0.19
SHOX-204ENST00000554971 HARBI1Q96MB7 349 aa13.85□□□□□ -0.19
SHOX-204ENST00000554971 TET2Q6N021 2002 aaPredicted RBP13.85□□□□□ -0.19
SHOX-204ENST00000554971 IGLV1-47P01700 117 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 RNASE2P10153 161 aaKnown RBP13.84□□□□□ -0.19
SHOX-204ENST00000554971 SAA4P35542 130 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 CD69Q07108 199 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 C9orf139Q6ZV77 190 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 MRPL20Q9BYC9 149 aaKnown RBP13.84□□□□□ -0.19
SHOX-204ENST00000554971 SEPSECSQ9HD40 501 aaKnown RBP13.84□□□□□ -0.19
SHOX-204ENST00000554971 MDFIC2A0A1B0GVS7 189 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 SUB1P53999 127 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHOX-204ENST00000554971 ACTL10Q5JWF8 245 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 LHFPL4Q7Z7J7 247 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 OR4P4Q8NGL7 312 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 RNASEH2CQ8TDP1 164 aaKnown RBP13.84□□□□□ -0.19
SHOX-204ENST00000554971 SFRP2Q96HF1 295 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 ZNF48Q96MX3 618 aaPredicted RBP13.84□□□□□ -0.19
SHOX-204ENST00000554971 CLEC7AQ9BXN2 247 aa13.84□□□□□ -0.19
SHOX-204ENST00000554971 GPR61Q9BZJ8 451 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms