RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CRYGCP07315 174 aa18.75■□□□□ 0.59
FOXA1-202ENST00000545425 WT1-ASQ06250 92 aa18.75■□□□□ 0.59
FOXA1-202ENST00000545425 GFRALQ6UXV0 394 aa18.75■□□□□ 0.59
FOXA1-202ENST00000545425 ZCCHC24Q8N2G6 241 aaKnown RBP18.75■□□□□ 0.59
FOXA1-202ENST00000545425 CADP27708 2225 aa18.75■□□□□ 0.59
FOXA1-202ENST00000545425 RBP4P02753 201 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 RBPJQ06330 500 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 BAGE3Q86Y29 109 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 BAGE2Q86Y30 109 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 PERPQ96FX8 193 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 TRGV9Q99603 122 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 DYNLRB1Q9NP97 96 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 USP9XQ93008 2570 aaPredicted RBP18.74■□□□□ 0.59
FOXA1-202ENST00000545425 IZUMO1RA6ND01 250 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 IGHV1-8P0DP01 117 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 GATA2P23769 480 aaPredicted RBP18.74■□□□□ 0.59
FOXA1-202ENST00000545425 ZNF600Q6ZNG1 722 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 OR2T6Q8NHC8 308 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 CCL17Q92583 94 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 ZNF355PQ9NSJ1 428 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 ZNRD1Q9P1U0 126 aa18.74■□□□□ 0.59
FOXA1-202ENST00000545425 AMMECR1Q9Y4X0 333 aaPredicted RBP18.74■□□□□ 0.59
FOXA1-202ENST00000545425 CGB1A6NKQ9 187 aa18.73■□□□□ 0.59
FOXA1-202ENST00000545425 PRRX1P54821 245 aa18.73■□□□□ 0.59
FOXA1-202ENST00000545425 OR5I1Q13606 314 aa18.73■□□□□ 0.59
FOXA1-202ENST00000545425 TMEM133Q9H2Q1 129 aa18.73■□□□□ 0.59
FOXA1-202ENST00000545425 HECTD1Q9ULT8 2610 aa18.73■□□□□ 0.59
FOXA1-202ENST00000545425 POLEQ07864 2286 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 REG1AP05451 166 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 BRS3P32247 399 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 TMEM136Q6ZRR5 245 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 NPIPB3Q92617 1050 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 NAT8BQ9UHF3 227 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 TP53TG3Q9ULZ0 132 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 SETXQ7Z333 2677 aaKnown RBP18.72■□□□□ 0.59
FOXA1-202ENST00000545425 B9A039 149 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 PEX7O00628 323 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 FCN3O75636 299 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 MLANAQ16655 118 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 RNF5Q99942 180 aa18.72■□□□□ 0.59
FOXA1-202ENST00000545425 FNDC4Q9H6D8 234 aaPredicted RBP18.72■□□□□ 0.59
FOXA1-202ENST00000545425 IGKV1D-37A0A075B6S9 117 aa18.71■□□□□ 0.59
FOXA1-202ENST00000545425 SERF1AO75920 110 aa18.71■□□□□ 0.59
FOXA1-202ENST00000545425 CASP6P55212 293 aa18.71■□□□□ 0.59
FOXA1-202ENST00000545425 ZNF329Q86UD4 541 aa18.71■□□□□ 0.59
FOXA1-202ENST00000545425 GRAMD2BQ96HH9 432 aa18.71■□□□□ 0.59
FOXA1-202ENST00000545425 RBM14Q96PK6 669 aaKnown RBP18.71■□□□□ 0.59
FOXA1-202ENST00000545425 SRSF8Q9BRL6 282 aaKnown RBP18.71■□□□□ 0.59
FOXA1-202ENST00000545425 PTPN13Q12923 2485 aa18.71■□□□□ 0.59
FOXA1-202ENST00000545425 APOBEC3AP31941 199 aaPredicted RBP18.7■□□□□ 0.58
FOXA1-202ENST00000545425 PLP1P60201 277 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 TEX43Q6ZNM6 134 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 PSMG3-AS1Q96PY0 264 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 C20orf144Q9BQM9 153 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 CTSZQ9UBR2 303 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 YLPM1P49750 1951 aaKnown RBP18.7■□□□□ 0.58
FOXA1-202ENST00000545425 GRIFINA4D1Z8 144 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 NUPR1O60356 82 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 REG1BP48304 166 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 TMEM183BQ1AE95 376 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 LYPD2Q6UXB3 125 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 TMEM116Q8NCL8 245 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 FXYD5Q96DB9 178 aa18.7■□□□□ 0.58
FOXA1-202ENST00000545425 RNASE7Q9H1E1 156 aaKnown RBP18.7■□□□□ 0.58
FOXA1-202ENST00000545425 ZNF331Q9NQX6 463 aaPredicted RBP18.7■□□□□ 0.58
FOXA1-202ENST00000545425 POLR3KQ9Y2Y1 108 aaPredicted RBP18.7■□□□□ 0.58
FOXA1-202ENST00000545425 IGHV1-69-2A0A0G2JMI3 117 aa18.69■□□□□ 0.58
FOXA1-202ENST00000545425 A0A1W2PPI3 338 aa18.69■□□□□ 0.58
FOXA1-202ENST00000545425 SHISA9B4DS77 424 aa18.69■□□□□ 0.58
FOXA1-202ENST00000545425 MGST1P10620 155 aaKnown RBP18.69■□□□□ 0.58
FOXA1-202ENST00000545425 MYCNOSP40205 109 aa18.69■□□□□ 0.58
FOXA1-202ENST00000545425 RPL27AP46776 148 aaKnown RBP18.69■□□□□ 0.58
FOXA1-202ENST00000545425 PATE2Q6UY27 113 aa18.69■□□□□ 0.58
FOXA1-202ENST00000545425 MBD6Q96DN6 1003 aa18.69■□□□□ 0.58
FOXA1-202ENST00000545425 SAMD10Q9BYL1 202 aa18.69■□□□□ 0.58
FOXA1-202ENST00000545425 ZNF586Q9NXT0 402 aa18.69■□□□□ 0.58
FOXA1-202ENST00000545425 SLC25A17O43808 307 aa18.68■□□□□ 0.58
FOXA1-202ENST00000545425 CRYGBP07316 175 aa18.68■□□□□ 0.58
FOXA1-202ENST00000545425 HIST1H1EP10412 219 aaKnown RBP18.68■□□□□ 0.58
FOXA1-202ENST00000545425 CA7P43166 264 aa18.68■□□□□ 0.58
FOXA1-202ENST00000545425 LINC00310P59036 64 aa18.68■□□□□ 0.58
FOXA1-202ENST00000545425 ATP5L2Q7Z4Y8 100 aa18.68■□□□□ 0.58
FOXA1-202ENST00000545425 SIGLECL1Q8N7X8 197 aa18.68■□□□□ 0.58
FOXA1-202ENST00000545425 TNFRSF19Q9NS68 423 aa18.68■□□□□ 0.58
FOXA1-202ENST00000545425 USP9YO00507 2555 aaPredicted RBP18.68■□□□□ 0.58
FOXA1-202ENST00000545425 IGLC7A0M8Q6 106 aa18.67■□□□□ 0.58
FOXA1-202ENST00000545425 ZNF705FA8MVS1 300 aaPredicted RBP18.67■□□□□ 0.58
FOXA1-202ENST00000545425 E7EUB6 86 aa18.67■□□□□ 0.58
FOXA1-202ENST00000545425 ZNF705DP0CH99 300 aaPredicted RBP18.67■□□□□ 0.58
FOXA1-202ENST00000545425 ZNF705BP0CI00 300 aaPredicted RBP18.67■□□□□ 0.58
FOXA1-202ENST00000545425 USF2Q15853 346 aaPredicted RBP18.67■□□□□ 0.58
FOXA1-202ENST00000545425 TBX15Q96SF7 602 aa18.67■□□□□ 0.58
FOXA1-202ENST00000545425 MRPL27Q9P0M9 148 aaKnown RBP18.67■□□□□ 0.58
FOXA1-202ENST00000545425 KLF12Q9Y4X4 402 aa18.67■□□□□ 0.58
FOXA1-202ENST00000545425 SVILO95425 2214 aa18.67■□□□□ 0.58
FOXA1-202ENST00000545425 M0QZK8 103 aa18.67■□□□□ 0.58
FOXA1-202ENST00000545425 Q6ZWC4 215 aa18.67■□□□□ 0.58
FOXA1-202ENST00000545425 DOPEY2Q9Y3R5 2298 aa18.66■□□□□ 0.58
FOXA1-202ENST00000545425 COL12A1Q99715 3063 aa18.66■□□□□ 0.58
FOXA1-202ENST00000545425 TRAV5A0A0B4J249 113 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms