RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 SHBGP04278 402 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 COX5BP10606 129 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 SCGB1A1P11684 91 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 UCHL3P15374 230 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 UGT2B7P16662 529 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 ZNF25P17030 456 aaPredicted RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 PSMB6P28072 239 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 CXCR4P61073 352 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 NCS1P62166 190 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 PSPHP78330 225 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 AKR1C1Q04828 323 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 HMGN3Q15651 99 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 AKR1C8PQ5T2L2 129 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 LPCAT3Q6P1A2 487 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 TEX261Q6UWH6 196 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 C7orf65Q6ZTY9 151 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 PHF13Q86YI8 300 aaPredicted RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 PDZD9Q8IXQ8 264 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 LINC00301Q8NCQ3 95 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 OR5B17Q8NGF7 314 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 OR13D1Q8NGV5 346 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 OR4K15Q8NH41 348 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 OR10J5Q8NHC4 309 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 MCFD2Q8NI22 146 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 ZNF431Q8TF32 576 aaPredicted RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 GNPNAT1Q96EK6 184 aaPredicted RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 ZNF514Q96K75 400 aaPredicted RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 S100A13Q99584 98 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 VPS25Q9BRG1 176 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 PBDC1Q9BVG4 233 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 PCBD2Q9H0N5 130 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 NMNAT1Q9HAN9 279 aaPredicted RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 TPT1P8Q9HAU6 139 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 CACYBPQ9HB71 228 aaKnown RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 SPANXB1Q9NS25 103 aaPredicted RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 SCN3BQ9NY72 215 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 METTL1Q9UBP6 276 aaKnown RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 TPRKBQ9Y3C4 175 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 HSPB11Q9Y547 144 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 U3KQ87 197 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 V9GYS6 101 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 FREM1Q5H8C1 2179 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 ZNF518AQ6AHZ1 1483 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 CROCC2H7BZ55 1655 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 RIMS1Q86UR5 1692 aaKnown RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 TROQ12816 1431 aaPredicted RBP1.22□□□□□ -2.21
LEMD3-205ENST00000544506 NSD3Q9BZ95 1437 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 TRAPPC8Q9Y2L5 1435 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 TAF1LQ8IZX4 1826 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 WNK3Q9BYP7 1800 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 SPEF2Q9C093 1822 aa1.22□□□□□ -2.21
LEMD3-205ENST00000544506 ARHGEF10O15013 1369 aa1.21□□□□□ -2.21
LEMD3-205ENST00000544506 IQGAP2Q13576 1575 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 INO80Q9ULG1 1556 aaPredicted RBP1.21□□□□□ -2.22
LEMD3-205ENST00000544506 PCDH15Q96QU1 1955 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SYCP2Q9BX26 1530 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SUPT6HQ7KZ85 1726 aaKnown RBP1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CPAMD8Q8IZJ3 1885 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 FANCAO15360 1455 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CDK12Q9NYV4 1490 aaPredicted RBP1.21□□□□□ -2.22
LEMD3-205ENST00000544506 TRAV38-1A0A0B4J264 116 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 A0A0D9SEW6 157 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 TMEM269A0A1B0GVZ9 245 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 TMEM218A2RU14 115 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 DISC1C4P0D8 188 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 TMEM238C9JI98 176 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 M0R233 179 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 COX7A2LO14548 114 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 PDCD5O14737 125 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 DLEU1O43261 78 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 TGOLN2O43493 480 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SSNA1O43805 119 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 PIAS1O75925 651 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SERPINA1P01009 418 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 APOC3P02656 99 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CD2P06729 351 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CRHP06850 196 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CTXN2P0C2S0 81 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 OR10J4P0C629 311 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 MYL12AP19105 171 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 KDELR1P24390 212 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 S100GP29377 79 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CASP1P29466 404 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 DDTP30046 118 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 S100A11P31949 105 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 CDC42P60953 191 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 RANP62826 216 aaKnown RBP1.21□□□□□ -2.22
LEMD3-205ENST00000544506 PPP3R1P63098 170 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 RPL19P84098 196 aaKnown RBP1.21□□□□□ -2.22
LEMD3-205ENST00000544506 DEFA5Q01523 94 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 MGAT3Q09327 533 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 TAF1AQ15573 450 aaPredicted RBP1.21□□□□□ -2.22
LEMD3-205ENST00000544506 NEDD8Q15843 81 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 IMPG1Q17R60 797 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 Q1T7F1 81 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 LRRC75BQ2VPJ9 315 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 C9orf64Q5T6V5 341 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 ACBD7Q8N6N7 88 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 OR9Q1Q8NGQ5 310 aa1.21□□□□□ -2.22
LEMD3-205ENST00000544506 SKA2Q8WVK7 121 aaPredicted RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms