RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 GGTLC3B5MD39 225 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 SPINT2O43291 252 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 NABP2Q9BQ15 211 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 PRR33A8MZF0 331 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 HTR1DP28221 377 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 GDF5OSQ5U4N7 250 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 Q8IYB0 196 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 NUP35Q8NFH5 326 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 PKIBQ9C010 78 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 CXXC4Q9H2H0 198 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 NCOR1P1Q9H4R4 102 aa13.7□□□□□ -0.22
PDCD2-208ENST00000541970 UBE2L3P68036 154 aaKnown RBP13.69□□□□□ -0.22
PDCD2-208ENST00000541970 CHODLQ9H9P2 273 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 GPR183P32249 361 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 TBR1Q16650 682 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 RPL39P5Q59GN2 51 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 BPIFA4PQ86YQ2 179 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 ST20Q9HBF5 79 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 MRPL27Q9P0M9 148 aaKnown RBP13.69□□□□□ -0.22
PDCD2-208ENST00000541970 SYS1-DBNDD2H3BUS1 97 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 PRB4P10163 310 aaPredicted RBP13.69□□□□□ -0.22
PDCD2-208ENST00000541970 TM4SF20Q53R12 229 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 TMEM167BQ9NRX6 74 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 TCF19Q9Y242 345 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 HCFC1P51610 2035 aa13.69□□□□□ -0.22
PDCD2-208ENST00000541970 TRAV5A0A0B4J249 113 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 PRSS47A8MTI9 375 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 NPIPB11E5RHQ5 1161 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 ISLRO14498 428 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 PLAUP00749 431 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 ITLN1Q8WWA0 313 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 SS18L1O75177 396 aaPredicted RBP13.68□□□□□ -0.22
PDCD2-208ENST00000541970 IGHV3-48P01763 117 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 PRDX2P32119 198 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 SMAGPQ0VAQ4 97 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 SNRNP40Q96DI7 357 aaKnown RBP13.68□□□□□ -0.22
PDCD2-208ENST00000541970 GTSF1LQ9H1H1 148 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 GFRA3O60609 400 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 ARF6P62330 175 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 FAM71F2Q6NXP2 309 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 WDR82Q6UXN9 313 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 Q6ZR03 302 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 GTF2H5Q6ZYL4 71 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 HES4Q9HCC6 221 aa13.68□□□□□ -0.22
PDCD2-208ENST00000541970 TNRC6BQ9UPQ9 1833 aaKnown RBP13.67□□□□□ -0.22
PDCD2-208ENST00000541970 IGHV1-18A0A0C4DH31 117 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 SPRNQ5BIV9 151 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 LHFPL4Q7Z7J7 247 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 WDR31Q8NA23 367 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 ZBTB34Q8NCN2 500 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 CLUHP3Q96NS8 147 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 REG1AP05451 166 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 PRB3Q04118 309 aaPredicted RBP13.67□□□□□ -0.22
PDCD2-208ENST00000541970 SAMD13Q5VXD3 122 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 MAP1LC3CQ9BXW4 147 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 TMEM140Q9NV12 185 aa13.67□□□□□ -0.22
PDCD2-208ENST00000541970 P0C879 139 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 AREGP15514 252 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 PLP1P60201 277 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 PAX2Q02962 417 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 MLANAQ16655 118 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 TMEM186Q96B77 213 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 PGLYRP4Q96LB8 373 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 SMIM27A0A1W2PRY6 76 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 CD5LO43866 347 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 FOXE3Q13461 319 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 ACP7Q6ZNF0 438 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 OR4S2Q8NH73 311 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 H1FXQ92522 213 aaKnown RBP13.66□□□□□ -0.22
PDCD2-208ENST00000541970 ANKHD1Q8IWZ3 2542 aaKnown RBP13.66□□□□□ -0.22
PDCD2-208ENST00000541970 A0A1W2PRE2 83 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 OOEPA6NGQ2 149 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 PLXNB1O43157 2135 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 HIST1H1EP10412 219 aaKnown RBP13.66□□□□□ -0.22
PDCD2-208ENST00000541970 GNG5P63218 68 aa13.66□□□□□ -0.22
PDCD2-208ENST00000541970 DYSFO75923 2080 aa13.65□□□□□ -0.22
PDCD2-208ENST00000541970 C5orf17Q8NAS9 161 aa13.65□□□□□ -0.22
PDCD2-208ENST00000541970 S1PR3Q99500 378 aa13.65□□□□□ -0.22
PDCD2-208ENST00000541970 CHTOPQ9Y3Y2 248 aaKnown RBP13.65□□□□□ -0.22
PDCD2-208ENST00000541970 LY96Q9Y6Y9 160 aa13.65□□□□□ -0.22
PDCD2-208ENST00000541970 IGHV1-24A0A0C4DH33 117 aa13.65□□□□□ -0.22
PDCD2-208ENST00000541970 IGLC1P0CG04 106 aa13.65□□□□□ -0.22
PDCD2-208ENST00000541970 PYYP10082 97 aa13.65□□□□□ -0.22
PDCD2-208ENST00000541970 BLNKQ8WV28 456 aa13.65□□□□□ -0.22
PDCD2-208ENST00000541970 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
PDCD2-208ENST00000541970 IQCF6A8MYZ5 107 aa13.65□□□□□ -0.23
PDCD2-208ENST00000541970 TMEM249Q2WGJ8 235 aa13.65□□□□□ -0.23
PDCD2-208ENST00000541970 DUX4L9Q6RFH8 374 aaPredicted RBP13.65□□□□□ -0.23
PDCD2-208ENST00000541970 CCL13Q99616 98 aa13.65□□□□□ -0.23
PDCD2-208ENST00000541970 AMMECR1Q9Y4X0 333 aaPredicted RBP13.65□□□□□ -0.23
PDCD2-208ENST00000541970 CHEK1O14757 476 aa13.64□□□□□ -0.23
PDCD2-208ENST00000541970 TEX45Q8NA69 505 aa13.64□□□□□ -0.23
PDCD2-208ENST00000541970 RND1Q92730 232 aa13.64□□□□□ -0.23
PDCD2-208ENST00000541970 COQ2Q96H96 371 aa13.64□□□□□ -0.23
PDCD2-208ENST00000541970 TPPP3Q9BW30 176 aa13.64□□□□□ -0.23
PDCD2-208ENST00000541970 H3BTX0 84 aa13.64□□□□□ -0.23
PDCD2-208ENST00000541970 ZNF207O43670 478 aaKnown RBP13.64□□□□□ -0.23
PDCD2-208ENST00000541970 TAS2R45P59539 299 aa13.64□□□□□ -0.23
PDCD2-208ENST00000541970 HIST1H1AQ02539 215 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms