RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 OR52B4Q8NGK2 314 aa9.52□□□□□ -0.89
VEGFA-225ENST00000523950 OR2T35Q8NGX2 323 aa9.52□□□□□ -0.89
VEGFA-225ENST00000523950 PRR25Q96S07 402 aa9.52□□□□□ -0.89
VEGFA-225ENST00000523950 MGAT4CQ9UBM8 478 aa9.52□□□□□ -0.89
VEGFA-225ENST00000523950 UBQLN2Q9UHD9 624 aa9.52□□□□□ -0.89
VEGFA-225ENST00000523950 SORL1Q92673 2214 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 TMEM50AO95807 157 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 IGHV3-48P01763 117 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 CXCL3P19876 107 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 NKX2-1P43699 371 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-225ENST00000523950 ID3Q02535 119 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 CD69Q07108 199 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 FGL1Q08830 312 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 DEFB114Q30KQ6 69 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 HAPLN4Q86UW8 402 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 ZNF680Q8NEM1 530 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 OR4D5Q8NGN0 318 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 TMEM170AQ8WVE7 144 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 OR10C1Q96KK4 312 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 GINS3Q9BRX5 216 aa9.51□□□□□ -0.89
VEGFA-225ENST00000523950 LSM4Q9Y4Z0 139 aaKnown RBP9.51□□□□□ -0.89
VEGFA-225ENST00000523950 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 IGHV3-35A0A0C4DH35 117 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 MPTX1A8MV57 137 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 WRBO00258 174 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 IFNA4P05014 189 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 GPX4P36969 197 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-225ENST00000523950 IAH1Q2TAA2 248 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-225ENST00000523950 CD300EQ496F6 205 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-225ENST00000523950 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 DEFB121Q5J5C9 76 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 PRSS54Q6PEW0 395 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 SLC16A13Q7RTY0 426 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 C12orf45Q8N5I9 185 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-225ENST00000523950 OR1S2Q8NGQ3 325 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 CACNG8Q8WXS5 425 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 SEC22CQ9BRL7 303 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 C20orf24Q9BUV8 137 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 MED9Q9NWA0 146 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 SMAD5-AS1Q9Y6J3 95 aa9.5□□□□□ -0.89
VEGFA-225ENST00000523950 IAPPP10997 89 aa9.49□□□□□ -0.89
VEGFA-225ENST00000523950 BMI1P35226 326 aa9.49□□□□□ -0.89
VEGFA-225ENST00000523950 AP2S1P53680 142 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-225ENST00000523950 LGALSLQ3ZCW2 172 aaPredicted RBP9.49□□□□□ -0.89
VEGFA-225ENST00000523950 C11orf87Q6NUJ2 197 aa9.49□□□□□ -0.89
VEGFA-225ENST00000523950 GTSCR1Q86UQ5 136 aa9.49□□□□□ -0.89
VEGFA-225ENST00000523950 ZNF414Q96IQ9 312 aa9.49□□□□□ -0.89
VEGFA-225ENST00000523950 MAGT1Q9H0U3 335 aa9.49□□□□□ -0.89
VEGFA-225ENST00000523950 MRPL36Q9P0J6 103 aaKnown RBP9.49□□□□□ -0.89
VEGFA-225ENST00000523950 YIF1AO95070 293 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 IGLC1P0CG04 106 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 EDN2P20800 178 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 RND2P52198 227 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 YPEL3P61236 119 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-225ENST00000523950 POLR2GP62487 172 aaKnown RBP eCLIP9.48□□□□□ -0.89
VEGFA-225ENST00000523950 MLANAQ16655 118 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 BTNL8Q6UX41 500 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 TOMM20LQ6UXN7 152 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 SLC35E1Q96K37 410 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 RAB40CQ96S21 281 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 B9D2Q9BPU9 175 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 MLXQ9UH92 298 aa9.48□□□□□ -0.89
VEGFA-225ENST00000523950 STRAPQ9Y3F4 350 aaKnown RBP9.48□□□□□ -0.89
VEGFA-225ENST00000523950 PUS1Q9Y606 427 aaKnown RBP eCLIP9.48□□□□□ -0.89
VEGFA-225ENST00000523950 PRKDCP78527 4128 aaKnown RBP9.47□□□□□ -0.89
VEGFA-225ENST00000523950 TRAV14DV4A0A0A6YYC5 116 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 IZUMO1RA6ND01 250 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 SMLR1H3BR10 107 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 L7N2F9 121 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 IGKV1-17P01599 117 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 CD5P06127 495 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 M6PRP20645 277 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 OR10J1P30954 320 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 TAS2R30P59541 319 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 OPCMLQ14982 345 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 SPANXN5Q5MJ07 72 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 GSG1LQ6UXU4 331 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 RBPMS2Q6ZRY4 209 aaKnown RBP9.47□□□□□ -0.89
VEGFA-225ENST00000523950 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 OR11H4Q8NGC9 324 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 Q8WTZ3 238 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 SMIM8Q96KF7 97 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 TMEM231Q9H6L2 316 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 SMPXQ9UHP9 88 aa9.47□□□□□ -0.89
VEGFA-225ENST00000523950 C5orf51A6NDU8 294 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 ZNF785A8K8V0 405 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 A8MZ25 164 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 G3V3Q6 166 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 SSSCA1O60232 199 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 TSC22D2O75157 780 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 SCGB1D2O95969 90 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 FABP1P07148 127 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 TIGITQ495A1 244 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 Q8N1Y9 231 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 NPIPB3Q92617 1050 aa9.46□□□□□ -0.9
VEGFA-225ENST00000523950 ACY3Q96HD9 319 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms