RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 HUWE1Q7Z6Z7 4374 aaKnown RBP13.98□□□□□ -0.17
FAM49B-208ENST00000518344 COL7A1Q02388 2944 aa13.97□□□□□ -0.17
FAM49B-208ENST00000518344 IGHV3-66A0A0C4DH42 116 aa13.97□□□□□ -0.17
FAM49B-208ENST00000518344 FAM90A26D6RGX4 464 aa13.97□□□□□ -0.17
FAM49B-208ENST00000518344 MED6O75586 246 aa13.97□□□□□ -0.17
FAM49B-208ENST00000518344 IGKV1-17P01599 117 aa13.97□□□□□ -0.17
FAM49B-208ENST00000518344 OR1S2Q8NGQ3 325 aa13.97□□□□□ -0.17
FAM49B-208ENST00000518344 C20orf85Q9H1P6 137 aa13.97□□□□□ -0.17
FAM49B-208ENST00000518344 IGKV3-7A0A075B6H7 116 aa13.96□□□□□ -0.17
FAM49B-208ENST00000518344 IFNA21P01568 189 aa13.96□□□□□ -0.17
FAM49B-208ENST00000518344 APOHP02749 345 aaPredicted RBP13.96□□□□□ -0.17
FAM49B-208ENST00000518344 OR10J1P30954 320 aa13.96□□□□□ -0.17
FAM49B-208ENST00000518344 ATP5IP56385 69 aaPredicted RBP13.96□□□□□ -0.17
FAM49B-208ENST00000518344 Q8WTZ3 238 aa13.96□□□□□ -0.17
FAM49B-208ENST00000518344 ST8SIA2Q92186 375 aa13.96□□□□□ -0.17
FAM49B-208ENST00000518344 TM2D3Q9BRN9 247 aa13.96□□□□□ -0.17
FAM49B-208ENST00000518344 UBQLN2Q9UHD9 624 aa13.96□□□□□ -0.17
FAM49B-208ENST00000518344 TRAV6A0A075B6T7 132 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 RBMY1BA6NDE4 496 aaKnown RBP13.95□□□□□ -0.18
FAM49B-208ENST00000518344 RBMY1EA6NEQ0 496 aaKnown RBP13.95□□□□□ -0.18
FAM49B-208ENST00000518344 OR4C46A6NHA9 309 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 MPTX1A8MV57 137 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 WRBO00258 174 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 SYNGR2O43760 224 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 TCRBP04435 133 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 RBMY1DP0C7P1 496 aaKnown RBP13.95□□□□□ -0.18
FAM49B-208ENST00000518344 IGLC1P0CG04 106 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 NPPCP23582 126 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 BMI1P35226 326 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 TFPI2P48307 235 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 RAB11AP62491 216 aa13.95□□□□□ -0.18
FAM49B-208ENST00000518344 GPX4P36969 197 aaPredicted RBP13.94□□□□□ -0.18
FAM49B-208ENST00000518344 TCF24Q7RTU0 167 aa13.94□□□□□ -0.18
FAM49B-208ENST00000518344 CIB3Q96Q77 187 aaPredicted RBP13.94□□□□□ -0.18
FAM49B-208ENST00000518344 METTL26Q96S19 204 aa13.94□□□□□ -0.18
FAM49B-208ENST00000518344 PTTG2Q9NZH5 202 aa13.94□□□□□ -0.18
FAM49B-208ENST00000518344 YPEL3P61236 119 aaPredicted RBP13.93□□□□□ -0.18
FAM49B-208ENST00000518344 RPL11P62913 178 aaKnown RBP13.93□□□□□ -0.18
FAM49B-208ENST00000518344 RPP30P78346 268 aaKnown RBP13.93□□□□□ -0.18
FAM49B-208ENST00000518344 ZNF846Q147U1 533 aa13.93□□□□□ -0.18
FAM49B-208ENST00000518344 LINC00322Q6ZN03 302 aaPredicted RBP13.93□□□□□ -0.18
FAM49B-208ENST00000518344 LILRB2Q8N423 598 aa13.93□□□□□ -0.18
FAM49B-208ENST00000518344 GBGT1Q8N5D6 347 aa13.93□□□□□ -0.18
FAM49B-208ENST00000518344 SLC35E1Q96K37 410 aa13.93□□□□□ -0.18
FAM49B-208ENST00000518344 SPATA25Q9BR10 227 aa13.93□□□□□ -0.18
FAM49B-208ENST00000518344 TMEM231Q9H6L2 316 aa13.93□□□□□ -0.18
FAM49B-208ENST00000518344 VSIRQ9H7M9 311 aa13.93□□□□□ -0.18
FAM49B-208ENST00000518344 FAM240BA0A1B0GVZ2 78 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 DFFBO76075 338 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 PAFAH1B2P68402 229 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 ID3Q02535 119 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 SPANXN5Q5MJ07 72 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 FAM90A2PQ658T7 463 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 MZT2BQ6NZ67 158 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 WFDC3Q8IUB2 231 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 MITD1Q8WV92 249 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 NARS2Q96I59 477 aaKnown RBP13.92□□□□□ -0.18
FAM49B-208ENST00000518344 NUDT15Q9NV35 164 aa13.92□□□□□ -0.18
FAM49B-208ENST00000518344 A0A1W2PS18 150 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 CD5P06127 495 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 H2AFB2P0C5Z0 115 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 RD3LP0DJH9 198 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 CRYBB3P26998 211 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 NKX2-1P43699 371 aaPredicted RBP13.91□□□□□ -0.18
FAM49B-208ENST00000518344 POLR2GP62487 172 aaKnown RBP eCLIP13.91□□□□□ -0.18
FAM49B-208ENST00000518344 GAMTQ14353 236 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 CITED4Q96RK1 184 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 WDR12Q9GZL7 423 aaKnown RBP13.91□□□□□ -0.18
FAM49B-208ENST00000518344 BATF3Q9NR55 127 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 GSKIPQ9P0R6 139 aa13.91□□□□□ -0.18
FAM49B-208ENST00000518344 LOC102724200A0A096LPH7 203 aaPredicted RBP13.9□□□□□ -0.18
FAM49B-208ENST00000518344 ZFP92A6NM28 416 aa13.9□□□□□ -0.18
FAM49B-208ENST00000518344 H3BP45 60 aa13.9□□□□□ -0.18
FAM49B-208ENST00000518344 DNASE2O00115 360 aaPredicted RBP13.9□□□□□ -0.18
FAM49B-208ENST00000518344 IL4P05112 153 aa13.9□□□□□ -0.18
FAM49B-208ENST00000518344 IAH1Q2TAA2 248 aaPredicted RBP13.9□□□□□ -0.18
FAM49B-208ENST00000518344 ODF3L2Q3SX64 289 aa13.9□□□□□ -0.18
FAM49B-208ENST00000518344 OR4D5Q8NGN0 318 aa13.9□□□□□ -0.18
FAM49B-208ENST00000518344 TBC1D24Q9ULP9 559 aa13.9□□□□□ -0.18
FAM49B-208ENST00000518344 STRAPQ9Y3F4 350 aaKnown RBP13.9□□□□□ -0.18
FAM49B-208ENST00000518344 SSSCA1O60232 199 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 SCGB1D2O95969 90 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 TOMM40O96008 361 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 PSG1P11464 419 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 GRAMD2BQ96HH9 432 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 SEC22CQ9BRL7 303 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 GGTLC1Q9BX51 225 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 MS4A6AQ9H2W1 248 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 RETNQ9HD89 108 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 PSENENQ9NZ42 101 aa13.89□□□□□ -0.19
FAM49B-208ENST00000518344 UPK1BO75841 260 aa13.88□□□□□ -0.19
FAM49B-208ENST00000518344 HNRNPCP07910 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
FAM49B-208ENST00000518344 P2RY1P47900 373 aa13.88□□□□□ -0.19
FAM49B-208ENST00000518344 ASAH1Q13510 395 aa13.88□□□□□ -0.19
FAM49B-208ENST00000518344 USF2Q15853 346 aaPredicted RBP13.88□□□□□ -0.19
FAM49B-208ENST00000518344 APRG1Q8IVJ8 170 aa13.88□□□□□ -0.19
FAM49B-208ENST00000518344 ZNF431Q8TF32 576 aaPredicted RBP13.88□□□□□ -0.19
FAM49B-208ENST00000518344 RABAC1Q9UI14 185 aa13.88□□□□□ -0.19
FAM49B-208ENST00000518344 FAM25EA8MYX2 175 aa13.87□□□□□ -0.19
FAM49B-208ENST00000518344 CCSO14618 274 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms