RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 NXT2Q9NPJ8 142 aaKnown RBP13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 CYTL1Q9NRR1 136 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HEATR5BQ9P2D3 2071 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 IGHV2-26A0A0B4J1V2 119 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 A0A1B0GW64 132 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 Q0VFX4 171 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 OR10W1Q8NGF6 305 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 SLC25A15Q9Y619 301 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 TRBV6-6A0A0A6YYG2 114 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 ZNF672Q499Z4 452 aaPredicted RBP13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 NMSQ5H8A3 153 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 LDLRAD2Q5SZI1 272 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BKO60814 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HBDP02042 147 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BJP06899 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BOP23527 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BBP33778 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BDP58876 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BCP62807 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST2H2BEQ16778 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BHQ93079 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BNQ99877 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 HIST1H2BMQ99879 126 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 NDUFA3O95167 84 aa13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 SRSF1Q07955 248 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 ATP5L2Q7Z4Y8 100 aa13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 TRGV2A0A075B6R0 118 aa13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 WNT2P09544 360 aa13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 LINC00614P0C842 121 aa13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 RNF5Q99942 180 aa13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 IGHV1-8P0DP01 117 aa13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 KLHDC3Q9BQ90 382 aa13.64□□□□□ -0.23
PCDHA1-203ENST00000504120 PGPEP1LA6NFU8 196 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 EMP1P54849 157 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 PAX8Q06710 450 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 TMEM200BQ69YZ2 307 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 MDS2Q8NDY4 140 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 TRBV24-1A0A075B6N3 115 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 F2Z2F3 143 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 CD177Q8N6Q3 437 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 YAE1D1Q9NRH1 226 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 TMEM178BH3BS89 294 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 OVOL1O14753 267 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 MBNL3Q9NUK0 354 aaKnown RBP13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 SCN8AQ9UQD0 1980 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 OOSP1A8MZH6 123 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 IFI27P40305 119 aaPredicted RBP13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 OR5AN1Q8NGI8 311 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 GLMPQ8WWB7 406 aa13.63□□□□□ -0.23
PCDHA1-203ENST00000504120 STHQ8IWL8 128 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 CHCHD1Q96BP2 118 aaKnown RBP13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 SELLP14151 372 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 QRFPP83859 136 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 TMEM14EPQ6UXP3 125 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 VCX2Q9H322 139 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 LAMTOR2Q9Y2Q5 125 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 CACNA1EQ15878 2313 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 IGKV1-5P01602 117 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 C1QL4Q86Z23 238 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 MTURNQ8N3F0 131 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 A0A1W2PRX2 142 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 CNTFRP26992 372 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 DSCR9P59020 149 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 ORMDL2Q53FV1 153 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 DPH3Q96FX2 82 aa13.62□□□□□ -0.23
PCDHA1-203ENST00000504120 TRAV9-2A0A087WT02 112 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 TRAV5A0A0B4J249 113 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 UBE2CO00762 179 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 MLNRO43193 412 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 NIT1Q86X76 327 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 ZNF318Q5VUA4 2279 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 TRAV41A0A0B4J266 112 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 FBLN7Q53RD9 439 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 JMJD8Q96S16 334 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 EFNA4P52798 201 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 MINOS1Q5TGZ0 78 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 COQ2Q96H96 371 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 CYSLTR1Q9Y271 337 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 SPCS1Q9Y6A9 102 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 MINOS1-NBL1R4GNA1 71 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 IGHV1-3A0A0C4DH29 117 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 A0A1B0GWB2 263 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 B3GALT5-AS1P59052 145 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 Q6ZS49 121 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 SLC25A48Q6ZT89 311 aaKnown RBP13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 FOXL2NBQ6ZUU3 175 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 NDUFAF3Q9BU61 184 aa13.61□□□□□ -0.23
PCDHA1-203ENST00000504120 C10orf55Q5SWW7 151 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 SIGLEC15Q6ZMC9 328 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 TRGV11A0A075B6L2 103 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 TRAV40A0A0B4J280 105 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 DPM2O94777 84 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 SDK2Q58EX2 2172 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 TPTE2P1Q5T6R2 138 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 RALGAPA1Q6GYQ0 2036 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 ST6GALNAC3Q8NDV1 305 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 C5orf63A6NC05 138 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 BMPERQ8N8U9 685 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 TOMM7Q9P0U1 55 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms