RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 TRGV9Q99603 122 aa13.3□□□□□ -0.28
TOM1-216ENST00000492723 SRSF8Q9BRL6 282 aaKnown RBP13.3□□□□□ -0.28
TOM1-216ENST00000492723 ELOVL1Q9BW60 279 aa13.3□□□□□ -0.28
TOM1-216ENST00000492723 GSX1Q9H4S2 264 aaPredicted RBP13.3□□□□□ -0.28
TOM1-216ENST00000492723 USP24Q9UPU5 2620 aa13.3□□□□□ -0.28
TOM1-216ENST00000492723 SVEP1Q4LDE5 3571 aa13.3□□□□□ -0.28
TOM1-216ENST00000492723 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 NCBP2LA6PVI3 153 aaKnown RBP13.29□□□□□ -0.28
TOM1-216ENST00000492723 HNF1AP20823 631 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 S100PP25815 95 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 OR1B1Q8NGR6 318 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 LPAR2Q9HBW0 351 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 DOPEY1Q5JWR5 2465 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
TOM1-216ENST00000492723 C5orf52A6NGY3 159 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 PFN1P07737 140 aaKnown RBP13.29□□□□□ -0.28
TOM1-216ENST00000492723 PDLIM4P50479 330 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 LINC00305Q7Z4B0 112 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 TBX15Q96SF7 602 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 C12orf57Q99622 126 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 CCL19Q99731 98 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 ABCA1O95477 2261 aa13.29□□□□□ -0.28
TOM1-216ENST00000492723 GGTLC3B5MD39 225 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 PYYP10082 97 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 ELOA3CA0A087WX78 387 aaPredicted RBP13.28□□□□□ -0.28
TOM1-216ENST00000492723 I3L2K1 104 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 TRGC2P03986 189 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 CRYBB3P26998 211 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 CLEC12BQ2HXU8 276 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 PAXXQ9BUH6 204 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 MYO18BQ8IUG5 2567 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 ZFYVE26Q68DK2 2539 aa13.28□□□□□ -0.28
TOM1-216ENST00000492723 RNF224P0DH78 156 aa13.27□□□□□ -0.28
TOM1-216ENST00000492723 UBE2E1P51965 193 aa13.27□□□□□ -0.28
TOM1-216ENST00000492723 SUMO1P63165 101 aaKnown RBP13.27□□□□□ -0.28
TOM1-216ENST00000492723 OCC1Q8TAD7 63 aa13.27□□□□□ -0.28
TOM1-216ENST00000492723 A0A1W2PRE2 83 aa13.27□□□□□ -0.29
TOM1-216ENST00000492723 TMEM11P17152 192 aa13.27□□□□□ -0.29
TOM1-216ENST00000492723 FABP9Q0Z7S8 132 aa13.27□□□□□ -0.29
TOM1-216ENST00000492723 SFRP2Q96HF1 295 aa13.27□□□□□ -0.29
TOM1-216ENST00000492723 OR51M1Q9H341 326 aa13.27□□□□□ -0.29
TOM1-216ENST00000492723 TBL2Q9Y4P3 447 aaKnown RBP13.27□□□□□ -0.29
TOM1-216ENST00000492723 MDFIC2A0A1B0GVS7 189 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 PRB1P04280 392 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 CD99P14209 185 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 CX3CL1P78423 397 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 Q8N6K4 173 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 PERPQ96FX8 193 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 A0A1W2PPQ1 181 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 HELTA6NFD8 242 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 AP4M1O00189 453 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 HYPMO75409 117 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 KLF17Q5JT82 389 aaPredicted RBP13.26□□□□□ -0.29
TOM1-216ENST00000492723 ZNF562Q6V9R5 426 aa13.26□□□□□ -0.29
TOM1-216ENST00000492723 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 UBE2CO00762 179 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 SNRPCP09234 159 aaKnown RBP13.25□□□□□ -0.29
TOM1-216ENST00000492723 IGLC1P0CG04 106 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 SAA4P35542 130 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 EBI3Q14213 229 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 FAM168AQ92567 244 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 ARPC1AQ92747 370 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 C9JCJ5 164 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 K7EIM0 57 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 PPP1R2P9O14990 202 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 GOSR1O95249 250 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 SRP14P37108 136 aaKnown RBP13.25□□□□□ -0.29
TOM1-216ENST00000492723 PYGO2Q9BRQ0 406 aa13.25□□□□□ -0.29
TOM1-216ENST00000492723 K7EN84 100 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 TGOLN2O43493 480 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 FAM106CPP0CH98 169 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 PSG1P11464 419 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 NDPQ00604 133 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 TIGITQ495A1 244 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 FAM120AOSQ5T036 256 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 FXYD5Q96DB9 178 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 RASL11BQ9BPW5 248 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 PIMREGQ9BSJ6 248 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 VPS13CQ709C8 3753 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BKO60814 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BJP06899 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BOP23527 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BBP33778 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 GNG4P50150 75 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BDP58876 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BCP62807 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST2H2BEQ16778 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 CENPWQ5EE01 88 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.24□□□□□ -0.29
TOM1-216ENST00000492723 KCNIP4Q6PIL6 250 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BHQ93079 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 AJUBAQ96IF1 538 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 RBM14Q96PK6 669 aaKnown RBP13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BNQ99877 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 HIST1H2BMQ99879 126 aa13.24□□□□□ -0.29
TOM1-216ENST00000492723 ZMAT5Q9UDW3 170 aaKnown RBP13.24□□□□□ -0.29
TOM1-216ENST00000492723 PPP5D1E7EU14 171 aa13.23□□□□□ -0.29
TOM1-216ENST00000492723 MEOX2P50222 304 aa13.23□□□□□ -0.29
TOM1-216ENST00000492723 LYZP61626 148 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms