RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 CLEC3BP05452 202 aa8.58□□□□□ -1.04
HDLBP-242ENST00000488013 LGALS1P09382 135 aaKnown RBP8.58□□□□□ -1.04
HDLBP-242ENST00000488013 TPT1P13693 172 aaKnown RBP8.58□□□□□ -1.04
HDLBP-242ENST00000488013 MDKP21741 143 aaPredicted RBP8.58□□□□□ -1.04
HDLBP-242ENST00000488013 OR10J1P30954 320 aa8.58□□□□□ -1.04
HDLBP-242ENST00000488013 RUNX1Q01196 453 aa8.58□□□□□ -1.04
HDLBP-242ENST00000488013 BTNL8Q6UX41 500 aa8.58□□□□□ -1.04
HDLBP-242ENST00000488013 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
HDLBP-242ENST00000488013 THAP8Q8NA92 274 aa8.58□□□□□ -1.04
HDLBP-242ENST00000488013 SMIM3Q9BZL3 60 aa8.58□□□□□ -1.04
HDLBP-242ENST00000488013 WDR61Q9GZS3 305 aaKnown RBP8.58□□□□□ -1.04
HDLBP-242ENST00000488013 RNF24Q9Y225 148 aa8.58□□□□□ -1.04
HDLBP-242ENST00000488013 LSM4Q9Y4Z0 139 aaKnown RBP8.58□□□□□ -1.04
HDLBP-242ENST00000488013 DNHD1Q96M86 4753 aa8.58□□□□□ -1.04
HDLBP-242ENST00000488013 UBE2L5PA0A1B0GUS4 154 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 MFSD2BA6NFX1 497 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 RPLP1P05386 114 aaKnown RBP8.57□□□□□ -1.04
HDLBP-242ENST00000488013 ZP3P21754 424 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 YPEL3P61236 119 aaPredicted RBP8.57□□□□□ -1.04
HDLBP-242ENST00000488013 OPCMLQ14982 345 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 PXDC1Q5TGL8 231 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 STOML3Q8TAV4 291 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 Q8WTZ3 238 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 C4orf3Q8WVX3 66 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 TAF15Q92804 592 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDLBP-242ENST00000488013 ZNF471Q9BX82 626 aaPredicted RBP8.57□□□□□ -1.04
HDLBP-242ENST00000488013 PEF1Q9UBV8 284 aaKnown RBP8.57□□□□□ -1.04
HDLBP-242ENST00000488013 PFDN2Q9UHV9 154 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 TIMM9Q9Y5J7 89 aa8.57□□□□□ -1.04
HDLBP-242ENST00000488013 NIPBLQ6KC79 2804 aaeCLIP8.57□□□□□ -1.04
HDLBP-242ENST00000488013 BOLA2-SMG1P6H3BVE0 249 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 TGOLN2O43493 480 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 GGCTO75223 188 aaKnown RBP8.56□□□□□ -1.04
HDLBP-242ENST00000488013 MBP02144 154 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 HSPB1P04792 205 aaKnown RBP8.56□□□□□ -1.04
HDLBP-242ENST00000488013 IGLC1P0CG04 106 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 RD3LP0DJH9 198 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 FGF7P21781 194 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 RPL29P47914 159 aaKnown RBP8.56□□□□□ -1.04
HDLBP-242ENST00000488013 CAMLGP49069 296 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 SERF2P84101 59 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 KIAA0141Q14154 515 aaPredicted RBP8.56□□□□□ -1.04
HDLBP-242ENST00000488013 MLANAQ16655 118 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 AWAT1Q58HT5 328 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 KHDC1LQ5JSQ8 128 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 LAMTOR1Q6IAA8 161 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 CLEC19AQ6UXS0 136 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 Q6ZRG5 221 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 PRIMA1Q86XR5 153 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 NDUFA11Q86Y39 141 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 BAP18Q8IXM2 172 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 PHYHIPLQ96FC7 376 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 PSMG3Q9BT73 122 aaPredicted RBP8.56□□□□□ -1.04
HDLBP-242ENST00000488013 C19orf24Q9BVV8 132 aa8.56□□□□□ -1.04
HDLBP-242ENST00000488013 IGHV3-21A0A0B4J1V1 117 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 NUDT19A8MXV4 375 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 AGPAT2O15120 278 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 CTSGP08311 255 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 GPR183P32249 361 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 ARL3P36405 182 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 NKX2-5P52952 324 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-242ENST00000488013 ZNF616Q08AN1 781 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 FAM106AQ4KMX7 169 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 RPL7L1Q6DKI1 246 aaKnown RBP8.55□□□□□ -1.04
HDLBP-242ENST00000488013 ZNF600Q6ZNG1 722 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 BPIFCQ8NFQ6 507 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 DPF1Q92782 380 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 CCDC140Q96MF4 163 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 GINS3Q9BRX5 216 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 NPCDR1Q9BY65 106 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 ARV1Q9H2C2 271 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 WFDC1Q9HC57 220 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 CYTL1Q9NRR1 136 aa8.55□□□□□ -1.04
HDLBP-242ENST00000488013 PLXNB1O43157 2135 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 ELOA3CA0A087WX78 387 aaPredicted RBP8.54□□□□□ -1.04
HDLBP-242ENST00000488013 OR2T8A6NH00 312 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 UMAD1C9J7I0 102 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 OR2C1O95371 312 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 TSPAN15O95858 294 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 TOMM40O96008 361 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 IGKV1-17P01599 117 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 IGHV3-48P01763 117 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 SEC11BP0C7V7 166 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 RAB5CP51148 216 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 TCTEX1D4Q5JR98 221 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 C10orf99Q6UWK7 81 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 CYP2G1PQ6ZSU1 146 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 GPHB5Q86YW7 130 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 OR51G1Q8NGK1 321 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 OR2G3Q8NGZ4 309 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 CITED2Q99967 270 aaPredicted RBP8.54□□□□□ -1.04
HDLBP-242ENST00000488013 GNB4Q9HAV0 340 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 SLC45A2Q9UMX9 530 aa8.54□□□□□ -1.04
HDLBP-242ENST00000488013 F8W735 103 aaPredicted RBP8.53□□□□□ -1.04
HDLBP-242ENST00000488013 I3L521 148 aa8.53□□□□□ -1.04
HDLBP-242ENST00000488013 BMPR1BO00238 502 aa8.53□□□□□ -1.04
HDLBP-242ENST00000488013 NDUFA4O00483 81 aa8.53□□□□□ -1.04
HDLBP-242ENST00000488013 IGHV3-11P01762 117 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms