RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 POLR3KQ9Y2Y1 108 aaPredicted RBP14.53□□□□□ -0.08
COL9A3-205ENST00000466192 CSMD2Q7Z408 3487 aa14.53□□□□□ -0.08
COL9A3-205ENST00000466192 F6UZH7 168 aa14.53□□□□□ -0.08
COL9A3-205ENST00000466192 RND2P52198 227 aa14.53□□□□□ -0.08
COL9A3-205ENST00000466192 DEFA6Q01524 100 aa14.53□□□□□ -0.08
COL9A3-205ENST00000466192 OR5T1Q8NG75 326 aa14.53□□□□□ -0.08
COL9A3-205ENST00000466192 CELSR1Q9NYQ6 3014 aa14.53□□□□□ -0.08
COL9A3-205ENST00000466192 IGKV1D-37A0A075B6S9 117 aa14.52□□□□□ -0.08
COL9A3-205ENST00000466192 OR7C2O60412 319 aa14.52□□□□□ -0.08
COL9A3-205ENST00000466192 OR5G3P0C626 314 aa14.52□□□□□ -0.08
COL9A3-205ENST00000466192 CDX1P47902 265 aaPredicted RBP14.52□□□□□ -0.08
COL9A3-205ENST00000466192 PYY3Q5JQD4 70 aa14.52□□□□□ -0.08
COL9A3-205ENST00000466192 OR1P1Q8NH06 330 aa14.52□□□□□ -0.08
COL9A3-205ENST00000466192 TXNDC17Q9BRA2 123 aa14.52□□□□□ -0.08
COL9A3-205ENST00000466192 SLC25A33Q9BSK2 321 aa14.52□□□□□ -0.08
COL9A3-205ENST00000466192 TBL2Q9Y4P3 447 aaKnown RBP14.52□□□□□ -0.08
COL9A3-205ENST00000466192 ZFHX3Q15911 3703 aa14.52□□□□□ -0.09
COL9A3-205ENST00000466192 IGHV3-21A0A0B4J1V1 117 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 SCO2A0A1W2PP80 73 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 NDUFS8O00217 210 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 CNIH1O95406 144 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 CLEC2AQ6UVW9 174 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 C16orf82Q7Z2V1 217 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 C19orf24Q9BVV8 132 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 CTDSP1Q9GZU7 261 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 AURKAIP1Q9NWT8 199 aaPredicted RBP14.51□□□□□ -0.09
COL9A3-205ENST00000466192 TECRQ9NZ01 308 aaKnown RBP14.51□□□□□ -0.09
COL9A3-205ENST00000466192 DOK5Q9P104 306 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 F11RQ9Y624 299 aaKnown RBP14.51□□□□□ -0.09
COL9A3-205ENST00000466192 CENPEQ02224 2701 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 TCRBV4S1A1TA0A5B7 111 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 CRYGCP07315 174 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 RD3LP0DJH9 198 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 C5orf64Q2M2E5 130 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 Q8N6K4 173 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 ZNF503Q96F45 646 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 FBN2P35556 2912 aa14.51□□□□□ -0.09
COL9A3-205ENST00000466192 IGHV4-30-2A0A087WSY4 118 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 PSMB11A5LHX3 300 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 EBI3Q14213 229 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 MORN5Q5VZ52 161 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 ETFRF1Q6IPR1 90 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 THAP8Q8NA92 274 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 PERPQ96FX8 193 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 DNAJC4Q9NNZ3 241 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 A1L4Q6 167 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 IFITM10A6NMD0 228 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 OR10J4P0C629 311 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 SAA4P35542 130 aa14.5□□□□□ -0.09
COL9A3-205ENST00000466192 PGPEP1LA6NFU8 196 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 TAS2R45P59539 299 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 PQLC2Q6ZP29 291 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 NECAP1Q8NC96 275 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 TRAV5A0A0B4J249 113 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 COX7A2P2O60397 106 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 C8orf88P0DMB2 117 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 S100A2P29034 98 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 PAX8Q06710 450 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 FXYD3Q14802 87 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 LINC01551Q86U37 167 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 OR4X1Q8NH49 305 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 UHRF2Q96PU4 802 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 SRSF8Q9BRL6 282 aaKnown RBP14.49□□□□□ -0.09
COL9A3-205ENST00000466192 FAM103A1Q9BTL3 118 aaKnown RBP14.49□□□□□ -0.09
COL9A3-205ENST00000466192 TMEM167BQ9NRX6 74 aa14.49□□□□□ -0.09
COL9A3-205ENST00000466192 GAR1Q9NY12 217 aaKnown RBP14.49□□□□□ -0.09
COL9A3-205ENST00000466192 ANKRD17O75179 2603 aaKnown RBP14.48□□□□□ -0.09
COL9A3-205ENST00000466192 TRBV20OR9-2A0A075B6H5 130 aa14.48□□□□□ -0.09
COL9A3-205ENST00000466192 COX6B1P14854 86 aa14.48□□□□□ -0.09
COL9A3-205ENST00000466192 DNLZQ5SXM8 178 aa14.48□□□□□ -0.09
COL9A3-205ENST00000466192 TNFRSF19Q9NS68 423 aa14.48□□□□□ -0.09
COL9A3-205ENST00000466192 CENPVL3A0A0U1RRI6 287 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 NCBP2LA6PVI3 153 aaKnown RBP14.47□□□□□ -0.09
COL9A3-205ENST00000466192 H7BYZ3 331 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 CORTO00230 105 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 SELENOTP62341 195 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 FAM120AOSQ5T036 256 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 C10orf113Q5VZT2 155 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 FAM210BQ96KR6 192 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 MRPL32Q9BYC8 188 aaKnown RBP14.47□□□□□ -0.09
COL9A3-205ENST00000466192 WNT10AQ9GZT5 417 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 NPFFO15130 113 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 TMEM11P17152 192 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 PATE2Q6UY27 113 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 TMEM116Q8NCL8 245 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 C22orf15Q8WYQ4 148 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 C14orf144Q96I85 54 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 SLC25A2Q9BXI2 301 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 PRDM13Q9H4Q3 707 aa14.47□□□□□ -0.09
COL9A3-205ENST00000466192 HIST1H1BP16401 226 aaKnown RBP14.46□□□□□ -0.09
COL9A3-205ENST00000466192 OR1L4Q8NGR5 311 aa14.46□□□□□ -0.09
COL9A3-205ENST00000466192 FAM167A-AS1Q96KT0 104 aa14.46□□□□□ -0.09
COL9A3-205ENST00000466192 BPIFB3P59826 476 aa14.46□□□□□ -0.1
COL9A3-205ENST00000466192 OR5AU1Q8NGC0 362 aa14.46□□□□□ -0.1
COL9A3-205ENST00000466192 RNF2Q99496 336 aa14.46□□□□□ -0.1
COL9A3-205ENST00000466192 GSX1Q9H4S2 264 aaPredicted RBP14.46□□□□□ -0.1
COL9A3-205ENST00000466192 ZNF355PQ9NSJ1 428 aa14.46□□□□□ -0.1
COL9A3-205ENST00000466192 ORM2P19652 201 aa14.45□□□□□ -0.1
COL9A3-205ENST00000466192 HNF1AP20823 631 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms