RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 SCRT1Q9BWW7 348 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 FBXL15Q9H469 300 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 PLNP26678 52 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 SHISA5Q8N114 240 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 ZNHIT1O43257 154 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 CCDC144NLQ6NUI1 221 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 TEX45Q8NA69 505 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 IGHV3OR15-7A0A075B7D8 119 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
LIN54-202ENST00000442461 K7EQS6 105 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 SPINT1O43278 529 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 FOXH1O75593 365 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 IGKV1D-33P01593 117 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 IGKV1-33P01594 117 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 C6orf15Q6UXA7 325 aaPredicted RBP8.57□□□□□ -1.04
LIN54-202ENST00000442461 COL4A1P02462 1669 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 DOCK6Q96HP0 2047 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 COX7A1P24310 79 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 CXCL12P48061 93 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 MNX1P50219 401 aaPredicted RBP8.56□□□□□ -1.04
LIN54-202ENST00000442461 LGALS9BQ3B8N2 356 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 LGALS9CQ6DKI2 356 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 EBLN2Q6P2I7 272 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
LIN54-202ENST00000442461 C16orf54Q6UWD8 224 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 CYYR1Q96J86 154 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 FAM90A9PA6NNJ1 464 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 NPIPB11E5RHQ5 1161 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 NPIPB6E9PJ23 425 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 PPIFP30405 207 aaKnown RBP8.56□□□□□ -1.04
LIN54-202ENST00000442461 APOBEC3AP31941 199 aaPredicted RBP8.56□□□□□ -1.04
LIN54-202ENST00000442461 KIAA2026Q5HYC2 2103 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 TRAV12-3A0A0B4J271 114 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 FXYD7P58549 80 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 TCTEX1D4Q5JR98 221 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 PRSS57Q6UWY2 283 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 PPP1R32Q7Z5V6 425 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 OR9G1Q8NH87 305 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
LIN54-202ENST00000442461 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
LIN54-202ENST00000442461 GLI3P10071 1580 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 STRCP1A6NGW2 1772 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 SHANK1Q9Y566 2161 aa8.56□□□□□ -1.04
LIN54-202ENST00000442461 C15orf61A6NNL5 157 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 MFAP4P55083 255 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 CD69Q07108 199 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 UBALD2Q8IYN6 164 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 PSG8Q9UQ74 426 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 FHL1Q13642 323 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 LCNL1Q6ZST4 164 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 LEAP2Q969E1 77 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 CITED2Q99967 270 aaPredicted RBP8.55□□□□□ -1.04
LIN54-202ENST00000442461 CASP8AP2Q9UKL3 1982 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 RALGAPA1Q6GYQ0 2036 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 FOXI3A8MTJ6 420 aaPredicted RBP8.55□□□□□ -1.04
LIN54-202ENST00000442461 NTF4P34130 210 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 IFI27P40305 119 aaPredicted RBP8.55□□□□□ -1.04
LIN54-202ENST00000442461 LHX8Q68G74 356 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 OSR1Q8TAX0 266 aaPredicted RBP8.55□□□□□ -1.04
LIN54-202ENST00000442461 CT55Q8WUE5 264 aa8.55□□□□□ -1.04
LIN54-202ENST00000442461 LINC01549A6NIU2 74 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 C9orf172C9J069 976 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 NDUFB8O95169 186 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 PEAR1Q5VY43 1037 aaPredicted RBP8.54□□□□□ -1.04
LIN54-202ENST00000442461 SPTBN1Q01082 2364 aaKnown RBP8.54□□□□□ -1.04
LIN54-202ENST00000442461 IDI2-AS1Q9NZ38 188 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 COL18A1P39060 1754 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 DOCK4Q8N1I0 1966 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 C15orf62A8K5M9 175 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 WFDC2Q14508 124 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 TAL2Q16559 108 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 Q6ZS49 121 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 CCL17Q92583 94 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 DOPEY2Q9Y3R5 2298 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 FABP5P3A8MUU1 101 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 K7ERJ3 54 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 NCR2O95944 276 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 CTSBP07858 339 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 LGALS7P47929 136 aa8.54□□□□□ -1.04
LIN54-202ENST00000442461 INTS1Q8N201 2190 aaKnown RBP8.54□□□□□ -1.04
LIN54-202ENST00000442461 PAPPAQ13219 1627 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 CGB1A6NKQ9 187 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 C1orf147Q96MC9 270 aaPredicted RBP8.53□□□□□ -1.04
LIN54-202ENST00000442461 SCN5AQ14524 2016 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 SMIM27A0A1W2PRY6 76 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 TCRBV4S1A1TA0A5B7 111 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 PRSS29PA6NIE9 313 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 AHRRA9YTQ3 701 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 TMEM30BQ3MIR4 351 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 ZIC4Q8N9L1 334 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 TMEM126AQ9H061 195 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 H3BMM0 161 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 H7C1H1 209 aa8.53□□□□□ -1.04
LIN54-202ENST00000442461 M0R381 172 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms