RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ZNF462Q96JM2 2506 aa13.34□□□□□ -0.27
CMTM3-202ENST00000424011 IGHV1-3A0A0C4DH29 117 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 CD33P20138 364 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 COX7A1P24310 79 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 PAFAH1B2P68402 229 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 MIC13Q5XKP0 118 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 TEPPQ6URK8 271 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 TEX45Q8NA69 505 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 TPPP2P59282 170 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 KCNIP4Q6PIL6 250 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 CLEC2AQ6UVW9 174 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 NUDT10Q8NFP7 164 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 OR4P4Q8NGL7 312 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 MANBALQ9NQG1 85 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 LSM4Q9Y4Z0 139 aaKnown RBP13.33□□□□□ -0.28
CMTM3-202ENST00000424011 TRAPPC1Q9Y5R8 145 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 PXMP4Q9Y6I8 212 aa13.33□□□□□ -0.28
CMTM3-202ENST00000424011 PAGE4O60829 102 aa13.32□□□□□ -0.28
CMTM3-202ENST00000424011 C1orf122Q6ZSJ8 110 aa13.32□□□□□ -0.28
CMTM3-202ENST00000424011 MOB3BQ86TA1 216 aa13.32□□□□□ -0.28
CMTM3-202ENST00000424011 PNKDQ8N490 385 aa13.32□□□□□ -0.28
CMTM3-202ENST00000424011 OR11H6Q8NGC7 330 aa13.32□□□□□ -0.28
CMTM3-202ENST00000424011 LRBAP50851 2863 aa13.32□□□□□ -0.28
CMTM3-202ENST00000424011 SUB1P53999 127 aaKnown RBP eCLIP13.31□□□□□ -0.28
CMTM3-202ENST00000424011 LINC01551Q86U37 167 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 OR2D3Q8NGH3 330 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 OR4F5Q8NH21 305 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 VN1R17PQ8TDU5 208 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 SSMEM1Q8WWF3 244 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 OR4F4Q96R69 305 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 RNF5Q99942 180 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 ZNF430Q9H8G1 570 aaPredicted RBP13.31□□□□□ -0.28
CMTM3-202ENST00000424011 SLC45A2Q9UMX9 530 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 SLC25A17O43808 307 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 CEACAM3P40198 252 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 ARF6P62330 175 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 KIR3DL3Q8N743 410 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 OR4B1Q8NGF8 309 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 RPUSD4Q96CM3 377 aaKnown RBP13.31□□□□□ -0.28
CMTM3-202ENST00000424011 COL12A1Q99715 3063 aa13.31□□□□□ -0.28
CMTM3-202ENST00000424011 HRNRQ86YZ3 2850 aaPredicted RBP13.31□□□□□ -0.28
CMTM3-202ENST00000424011 A0A1W2PPV4 95 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 LY6LH3BQJ8 138 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 RNASE2P10153 161 aaKnown RBP13.3□□□□□ -0.28
CMTM3-202ENST00000424011 PRTN3P24158 256 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 HTR1DP28221 377 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 MMD2Q8IY49 270 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 FLNCQ14315 2725 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 DOPEY1Q5JWR5 2465 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 IGHV3-72A0A0B4J1Y9 119 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 TMEM250H0YL14 139 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 CIDEAO60543 219 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 DLX1P56177 255 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 CACNG8Q8WXS5 425 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 BTF3L4Q96K17 158 aa13.3□□□□□ -0.28
CMTM3-202ENST00000424011 CBY3A6NI87 242 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 ACTL6BO94805 426 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 TMEM249Q2WGJ8 235 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 ZNF738Q8NE65 137 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 OR10W1Q8NGF6 305 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 PARLQ9H300 379 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 DPM3Q9P2X0 92 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 LAMTOR2Q9Y2Q5 125 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 ESDP10768 282 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 COMPP49747 757 aaPredicted RBP13.29□□□□□ -0.28
CMTM3-202ENST00000424011 UBE2G2P60604 165 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 MAJINQ3KP22 176 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 TMEM144Q7Z5S9 345 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 HSPB9Q9BQS6 159 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 COX11Q9Y6N1 276 aa13.29□□□□□ -0.28
CMTM3-202ENST00000424011 USP9XQ93008 2570 aaPredicted RBP13.28□□□□□ -0.28
CMTM3-202ENST00000424011 CTRLP40313 264 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 SEPSECSQ9HD40 501 aaKnown RBP13.28□□□□□ -0.28
CMTM3-202ENST00000424011 UQCR10Q9UDW1 63 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 IGHV2-70DA0A0C4DH43 119 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 A0A0U1RQK1 487 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 ZNF320A2RRD8 509 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 C11orf94C9JXX5 98 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 OVOL3O00110 214 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 PRB3Q04118 309 aaPredicted RBP13.28□□□□□ -0.28
CMTM3-202ENST00000424011 PSG5Q15238 335 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 STPG3Q8N7X2 389 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 RITA1Q96K30 269 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 MYO18BQ8IUG5 2567 aa13.28□□□□□ -0.28
CMTM3-202ENST00000424011 HSBP1L1C9JCN9 74 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 E7EUB6 86 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 NDUFS7O75251 213 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 CRYGBP07316 175 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 ARL14EPLP0DKL9 152 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 NPPCP23582 126 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 CD69Q07108 199 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 SRSF1Q07955 248 aaKnown RBP eCLIP13.27□□□□□ -0.28
CMTM3-202ENST00000424011 OR4C5Q8NGB2 326 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 VPS25Q9BRG1 176 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 SIGLEC9Q9Y336 463 aa13.27□□□□□ -0.28
CMTM3-202ENST00000424011 MALRD1Q5VYJ5 2156 aa13.27□□□□□ -0.29
CMTM3-202ENST00000424011 TNCP24821 2201 aa13.27□□□□□ -0.29
CMTM3-202ENST00000424011 SPTAN1Q13813 2472 aaKnown RBP13.27□□□□□ -0.29
CMTM3-202ENST00000424011 A0A1W2PPI3 338 aa13.27□□□□□ -0.29
CMTM3-202ENST00000424011 STAG3L2P0CL84 134 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms