RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SCGB2A1O75556 95 aa14.06□□□□□ -0.16
TRIM56-202ENST00000412507 IGKV1-17P01599 117 aa14.06□□□□□ -0.16
TRIM56-202ENST00000412507 APOHP02749 345 aaPredicted RBP14.06□□□□□ -0.16
TRIM56-202ENST00000412507 OR4E1P0C645 316 aa14.06□□□□□ -0.16
TRIM56-202ENST00000412507 ETFRF1Q6IPR1 90 aa14.06□□□□□ -0.16
TRIM56-202ENST00000412507 ST8SIA2Q92186 375 aa14.06□□□□□ -0.16
TRIM56-202ENST00000412507 SPATA25Q9BR10 227 aa14.06□□□□□ -0.16
TRIM56-202ENST00000412507 IGKV3-7A0A075B6H7 116 aa14.05□□□□□ -0.16
TRIM56-202ENST00000412507 LYRM1O43325 122 aa14.05□□□□□ -0.16
TRIM56-202ENST00000412507 IGLC1P0CG04 106 aa14.05□□□□□ -0.16
TRIM56-202ENST00000412507 IAPPP10997 89 aa14.05□□□□□ -0.16
TRIM56-202ENST00000412507 ANXA7P20073 488 aaKnown RBP14.05□□□□□ -0.16
TRIM56-202ENST00000412507 DHRS2Q13268 280 aa14.05□□□□□ -0.16
TRIM56-202ENST00000412507 LYG2Q86SG7 212 aa14.05□□□□□ -0.16
TRIM56-202ENST00000412507 OR1S2Q8NGQ3 325 aa14.05□□□□□ -0.16
TRIM56-202ENST00000412507 IGHV3-66A0A0C4DH42 116 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 OR4C46A6NHA9 309 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 FAM90A26D6RGX4 464 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 ADAP1O75689 374 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 UPK1BO75841 260 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 IFNA4P05014 189 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 OR10J1P30954 320 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 C4orf46Q504U0 113 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 LILRB2Q8N423 598 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 NPIPB3Q92617 1050 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 ACY3Q96HD9 319 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 CITED4Q96RK1 184 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 MAGT1Q9H0U3 335 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 VSIRQ9H7M9 311 aa14.04□□□□□ -0.16
TRIM56-202ENST00000412507 MED6O75586 246 aa14.03□□□□□ -0.16
TRIM56-202ENST00000412507 BMI1P35226 326 aa14.03□□□□□ -0.16
TRIM56-202ENST00000412507 TFPI2P48307 235 aa14.03□□□□□ -0.16
TRIM56-202ENST00000412507 ODF3L2Q3SX64 289 aa14.03□□□□□ -0.16
TRIM56-202ENST00000412507 FAM90A2PQ658T7 463 aa14.03□□□□□ -0.16
TRIM56-202ENST00000412507 TCF24Q7RTU0 167 aa14.03□□□□□ -0.16
TRIM56-202ENST00000412507 COQ8AQ8NI60 647 aa14.03□□□□□ -0.16
TRIM56-202ENST00000412507 RETNQ9HD89 108 aa14.03□□□□□ -0.16
TRIM56-202ENST00000412507 AGRNO00468 2067 aa14.02□□□□□ -0.16
TRIM56-202ENST00000412507 DFFBO76075 338 aa14.02□□□□□ -0.17
TRIM56-202ENST00000412507 NPPCP23582 126 aa14.02□□□□□ -0.17
TRIM56-202ENST00000412507 ATP5IP56385 69 aaPredicted RBP14.02□□□□□ -0.17
TRIM56-202ENST00000412507 GBGT1Q8N5D6 347 aa14.02□□□□□ -0.17
TRIM56-202ENST00000412507 Q8WTZ3 238 aa14.02□□□□□ -0.17
TRIM56-202ENST00000412507 METTL26Q96S19 204 aa14.02□□□□□ -0.17
TRIM56-202ENST00000412507 C20orf85Q9H1P6 137 aa14.02□□□□□ -0.17
TRIM56-202ENST00000412507 MPTX1A8MV57 137 aa14.01□□□□□ -0.17
TRIM56-202ENST00000412507 WRBO00258 174 aa14.01□□□□□ -0.17
TRIM56-202ENST00000412507 SYNGR2O43760 224 aa14.01□□□□□ -0.17
TRIM56-202ENST00000412507 YPEL3P61236 119 aaPredicted RBP14.01□□□□□ -0.17
TRIM56-202ENST00000412507 PAIP2BQ9ULR5 123 aaKnown RBP14.01□□□□□ -0.17
TRIM56-202ENST00000412507 LOC102724200A0A096LPH7 203 aaPredicted RBP14□□□□□ -0.17
TRIM56-202ENST00000412507 TCRBP04435 133 aa14□□□□□ -0.17
TRIM56-202ENST00000412507 CRYBB3P26998 211 aa14□□□□□ -0.17
TRIM56-202ENST00000412507 GPX4P36969 197 aaPredicted RBP14□□□□□ -0.17
TRIM56-202ENST00000412507 DEFA1P59665 94 aa14□□□□□ -0.17
TRIM56-202ENST00000412507 DEFA3P59666 94 aa14□□□□□ -0.17
TRIM56-202ENST00000412507 RAB11AP62491 216 aa14□□□□□ -0.17
TRIM56-202ENST00000412507 CIB3Q96Q77 187 aaPredicted RBP14□□□□□ -0.17
TRIM56-202ENST00000412507 FAM110AQ9BQ89 295 aa14□□□□□ -0.17
TRIM56-202ENST00000412507 GGTLC1Q9BX51 225 aa14□□□□□ -0.17
TRIM56-202ENST00000412507 TMEM231Q9H6L2 316 aa14□□□□□ -0.17
TRIM56-202ENST00000412507 TRAV6A0A075B6T7 132 aa13.99□□□□□ -0.17
TRIM56-202ENST00000412507 A0A1W2PS18 150 aa13.99□□□□□ -0.17
TRIM56-202ENST00000412507 IFNA21P01568 189 aa13.99□□□□□ -0.17
TRIM56-202ENST00000412507 CD5P06127 495 aa13.99□□□□□ -0.17
TRIM56-202ENST00000412507 RPL11P62913 178 aaKnown RBP13.99□□□□□ -0.17
TRIM56-202ENST00000412507 GAMTQ14353 236 aa13.99□□□□□ -0.17
TRIM56-202ENST00000412507 WFDC3Q8IUB2 231 aa13.99□□□□□ -0.17
TRIM56-202ENST00000412507 SLC35E1Q96K37 410 aa13.99□□□□□ -0.17
TRIM56-202ENST00000412507 TOMM40O96008 361 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 IL4P05112 153 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 P2RY1P47900 373 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 PAFAH1B2P68402 229 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 ID3Q02535 119 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 ZNF124Q15973 351 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 APRG1Q8IVJ8 170 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 OR4D5Q8NGN0 318 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 MITD1Q8WV92 249 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 NARS2Q96I59 477 aaKnown RBP13.98□□□□□ -0.17
TRIM56-202ENST00000412507 MS4A6AQ9H2W1 248 aa13.98□□□□□ -0.17
TRIM56-202ENST00000412507 ZFP92A6NM28 416 aa13.97□□□□□ -0.17
TRIM56-202ENST00000412507 H3BP45 60 aa13.97□□□□□ -0.17
TRIM56-202ENST00000412507 DNASE2O00115 360 aaPredicted RBP13.97□□□□□ -0.17
TRIM56-202ENST00000412507 HNRNPCP07910 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRIM56-202ENST00000412507 RD3LP0DJH9 198 aa13.97□□□□□ -0.17
TRIM56-202ENST00000412507 PSG1P11464 419 aa13.97□□□□□ -0.17
TRIM56-202ENST00000412507 POLR2GP62487 172 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRIM56-202ENST00000412507 RPP30P78346 268 aaKnown RBP13.97□□□□□ -0.17
TRIM56-202ENST00000412507 USF2Q15853 346 aaPredicted RBP13.97□□□□□ -0.17
TRIM56-202ENST00000412507 SPANXN5Q5MJ07 72 aa13.97□□□□□ -0.17
TRIM56-202ENST00000412507 EDA2RQ9HAV5 297 aa13.97□□□□□ -0.17
TRIM56-202ENST00000412507 NUDT15Q9NV35 164 aa13.97□□□□□ -0.17
TRIM56-202ENST00000412507 U3KQE9 123 aa13.97□□□□□ -0.17
TRIM56-202ENST00000412507 IGKV1D-37A0A075B6S9 117 aa13.96□□□□□ -0.17
TRIM56-202ENST00000412507 NKX2-1P43699 371 aaPredicted RBP13.96□□□□□ -0.17
TRIM56-202ENST00000412507 ASAH1Q13510 395 aa13.96□□□□□ -0.17
TRIM56-202ENST00000412507 MZT2BQ6NZ67 158 aa13.96□□□□□ -0.17
TRIM56-202ENST00000412507 MUC7Q8TAX7 377 aa13.96□□□□□ -0.17
TRIM56-202ENST00000412507 MAP6D1Q9H9H5 199 aa13.96□□□□□ -0.17
TRIM56-202ENST00000412507 RABAC1Q9UI14 185 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms