RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 IL17DQ8TAD2 202 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 SLC25A40Q8TBP6 338 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 DYRK2Q92630 601 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 AMELYQ99218 206 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 PSMG3Q9BT73 122 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-202ENST00000409915 CHST6Q9GZX3 395 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 BANF2Q9H503 90 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 FNDC4Q9H6D8 234 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF442Q9H7R0 627 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 DYNLRB1Q9NP97 96 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 TAAR3PQ9P1P4 343 aa3.67□□□□□ -1.82
SF3B1-202ENST00000409915 RCL1Q9Y2P8 373 aaKnown RBP3.67□□□□□ -1.82
SF3B1-202ENST00000409915 ANK3Q12955 4377 aaKnown RBP3.67□□□□□ -1.82
SF3B1-202ENST00000409915 ACANP16112 2415 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 IGHV4-30-2A0A087WSY4 118 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 TRAV1-1A0A0B4J248 108 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 OR4C45A6NMZ5 311 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF727A8MUV8 499 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 LYNX1G3V0Z9 82 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 K7N7A8 449 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 M0R135 149 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 CD5LO43866 347 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 MPDU1O75352 247 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 HYPMO75409 117 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 HBZP02008 142 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 LYNX1P0DP58 116 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 F2RP25116 425 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 SAA4P35542 130 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 GLRXP35754 106 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 HNRNPA3P51991 378 aaKnown RBP3.66□□□□□ -1.82
SF3B1-202ENST00000409915 PIGPP57054 158 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 TAS2R30P59541 319 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 AESQ08117 197 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 RIGQ13278 110 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 INSL4Q14641 139 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 CLEC12BQ2HXU8 276 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 RSPO1Q2MKA7 263 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-202ENST00000409915 TIGITQ495A1 244 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 FAM106AQ4KMX7 169 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF585BQ52M93 769 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ACSM3Q53FZ2 586 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 SPRNQ5BIV9 151 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 SPIN3Q5JUX0 258 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 SPSB3Q6PJ21 355 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 CEACAM19Q7Z692 300 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF429Q86V71 674 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 OR5AS1Q8N127 324 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 LGI3Q8N145 548 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 C5orf17Q8NAS9 161 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 NEXN-AS1Q8NBZ9 246 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 OR1N2Q8NGR9 330 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 OR10X1Q8NGY0 326 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 OR2T27Q8NH04 317 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 OR2AE1Q8NHA4 323 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 SYNPRQ8TBG9 265 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 KLF14Q8TD94 323 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF799Q96GE5 643 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 TBX5Q99593 518 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 SMR3AQ99954 134 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 KRTAP9-3Q9BYQ3 159 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF586Q9NXT0 402 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF581Q9P0T4 197 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 IL36RNQ9UBH0 155 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF391Q9UJN7 358 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 KCNS2Q9ULS6 477 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 RFNGQ9Y644 331 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 ARFGEF3Q5TH69 2177 aa3.66□□□□□ -1.82
SF3B1-202ENST00000409915 MTORP42345 2549 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 IGLV3-9A0A075B6K5 115 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 SAA2-SAA4A0A096LPE2 208 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 TRAV38-1A0A0B4J264 116 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 IGHV3-64DA0A0J9YX35 117 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 PSMB11A5LHX3 300 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 MAP1LC3B2A6NCE7 125 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 FAM231BA6NCW3 169 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 RBFOX3A6NFN3 312 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 MSGN1A6NI15 193 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF705FA8MVS1 300 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF878C9JN71 531 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 SLC17A3O00476 420 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 FCN1O00602 326 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 SPRY3O43610 288 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 ENSAO43768 121 aaKnown RBP3.65□□□□□ -1.83
SF3B1-202ENST00000409915 PDE6DO43924 150 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 GNG7O60262 68 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 IGHV3-13P01766 116 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 CSN2P05814 226 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF705DP0CH99 300 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF705BP0CI00 300 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-202ENST00000409915 IGHV4-30-4P0DP06 118 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 PSG2P11465 335 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 CD99P14209 185 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 CA6P23280 308 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 CDK2P24941 298 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 HOXD3P31249 432 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-202ENST00000409915 LEPP41159 167 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 THBS3P49746 956 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 FUT6P51993 359 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 EFNA4P52798 201 aa3.65□□□□□ -1.83
SF3B1-202ENST00000409915 TPPP2P59282 170 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms