RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 FABP1P07148 127 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 TMEM11P17152 192 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 GATA2P23769 480 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 CD24P25063 80 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 AKR1C3P42330 323 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 MFAP2P55001 183 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 CX3CL1P78423 397 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 SSBP2P81877 361 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 C10orf113Q5VZT2 155 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 MIR17HGQ75NE6 70 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 DYNAPQ8N1N2 210 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 STXBP6Q8NFX7 210 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 OR4X1Q8NH49 305 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 TMEM37Q8WXS4 190 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 RPUSD4Q96CM3 377 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 UHRF2Q96PU4 802 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 DOK5Q9P104 306 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 HRNRQ86YZ3 2850 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 AKAP6Q13023 2319 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 MED13LQ71F56 2210 aa4.98□□□□□ -1.61
GTF3C3-202ENST00000409364 TET2Q6N021 2002 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 IGKV1D-37A0A075B6S9 117 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 CENPVL3A0A0U1RRI6 287 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 PSMB11A5LHX3 300 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 NPIPB5A8MRT5 1133 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 CLDN34H7C241 214 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 I3L2K1 104 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 NPFFO15130 113 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 RNF224P0DH78 156 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 APELAP0DMC3 54 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 FOLR2P14207 255 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 SAA4P35542 130 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 UBE2G2P60604 165 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 ZNF90Q03938 601 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 ZNF674Q2M3X9 581 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 SPATA31B1PQ5VZV4 182 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 LURAP1LQ8IV03 231 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 TTC9CQ8N5M4 171 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 AJUBAQ96IF1 538 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 PARLQ9H300 379 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 THYN1Q9P016 225 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 MLXQ9UH92 298 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 MYO18BQ8IUG5 2567 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 TRAV30A0A087WSZ9 112 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 LOC105371267A0A1B0GV96 52 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 A0A1W2PRE2 83 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 OR7C2O60412 319 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 HYPMO75409 117 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 NDUFB4O95168 129 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 IGHV3-48P01763 117 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 HLA-DRB1P01911 266 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 CRYBA1P05813 215 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 SLC25A16P16260 332 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 NPPCP23582 126 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 GATA3P23771 443 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 ATP5G3P48201 142 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 PLP1P60201 277 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 FLI1Q01543 452 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 FAM24BQ8N5W8 94 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 OR51G1Q8NGK1 321 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 ARPC1AQ92747 370 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 HIST1H2BAQ96A08 127 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 PERPQ96FX8 193 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 TMEM68Q96MH6 324 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 RASL11BQ9BPW5 248 aa4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 MRPL36Q9P0J6 103 aaKnown RBP4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 USP9XQ93008 2570 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-202ENST00000409364 IGHV4-30-2A0A087WSY4 118 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 IGHV1-69DA0A0B4J2H0 117 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 C1orf196B1AJZ1 125 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 B4DSR2 109 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 SMAD7O15105 426 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 IGHV1-69P01742 117 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 MSMBP08118 114 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 RD3LP0DJH9 198 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 HIST1H1BP16401 226 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 ORM2P19652 201 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 RAB5AP20339 215 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 RPL23P62829 140 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 SRSF1Q07955 248 aaKnown RBP eCLIP4.96□□□□□ -1.622e-7■■□□□ 12.9
GTF3C3-202ENST00000409364 ADIRFQ15847 76 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 PATE2Q6UY27 113 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 S100A7AQ86SG5 101 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 LINC00469Q8N7U9 141 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 Q8N9W7 124 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 ISOC2Q96AB3 205 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 FAM167A-AS1Q96KT0 104 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 PAXXQ9BUH6 204 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 MEGF9Q9H1U4 602 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 OR51M1Q9H341 326 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 YTHDF2Q9Y5A9 579 aaKnown RBP4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 DMRT1Q9Y5R6 373 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 ARHGAP32A7KAX9 2087 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 SPG11Q96JI7 2443 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 DCHS2Q6V1P9 2916 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 COL12A1Q99715 3063 aa4.96□□□□□ -1.62
GTF3C3-202ENST00000409364 FLNCQ14315 2725 aa4.95□□□□□ -1.62
GTF3C3-202ENST00000409364 IGHV3-21A0A0B4J1V1 117 aa4.95□□□□□ -1.62
GTF3C3-202ENST00000409364 IGHV7-81A0A0B4J1V7 117 aa4.95□□□□□ -1.62
GTF3C3-202ENST00000409364 TRAV20A0A0B4J274 112 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms