RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 TRAT1Q6PIZ9 186 aa13.23□□□□□ -0.29
LSP1-204ENST00000406638 SNAI2O43623 268 aa13.23□□□□□ -0.29
LSP1-204ENST00000406638 CIDEAO60543 219 aa13.23□□□□□ -0.29
LSP1-204ENST00000406638 FOXE3Q13461 319 aa13.23□□□□□ -0.29
LSP1-204ENST00000406638 ZNF826PQ6ZT77 177 aa13.23□□□□□ -0.29
LSP1-204ENST00000406638 MOB3BQ86TA1 216 aa13.23□□□□□ -0.29
LSP1-204ENST00000406638 IGF2BP2-AS1Q96M15 143 aa13.23□□□□□ -0.29
LSP1-204ENST00000406638 POLDIP2Q9Y2S7 368 aa13.23□□□□□ -0.29
LSP1-204ENST00000406638 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
LSP1-204ENST00000406638 HEATR1Q9H583 2144 aaKnown RBP13.23□□□□□ -0.29
LSP1-204ENST00000406638 SYS1-DBNDD2H3BUS1 97 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 KLF5Q13887 457 aaPredicted RBP13.22□□□□□ -0.29
LSP1-204ENST00000406638 Q8IYB0 196 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 COQ2Q96H96 371 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 NABP2Q9BQ15 211 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 PMCHL2Q9BQD1 86 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 TMEM167BQ9NRX6 74 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 TCF19Q9Y242 345 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 PRR20EP86478 221 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 PRR20CP86479 221 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 PRR20DP86480 221 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 PRR20BP86481 221 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 PRR20AP86496 221 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 MSMPQ1L6U9 139 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 FAM120AOSQ5T036 256 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 GFRALQ6UXV0 394 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 BHLHA15Q7RTS1 189 aaPredicted RBP13.22□□□□□ -0.29
LSP1-204ENST00000406638 OR13A1Q8NGR1 328 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 HINT2Q9BX68 163 aa13.22□□□□□ -0.29
LSP1-204ENST00000406638 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
LSP1-204ENST00000406638 IGHV1-18A0A0C4DH31 117 aa13.21□□□□□ -0.29
LSP1-204ENST00000406638 IGKV3-15P01624 115 aa13.21□□□□□ -0.29
LSP1-204ENST00000406638 DUTP33316 252 aaKnown RBP13.21□□□□□ -0.29
LSP1-204ENST00000406638 COMMD5Q9GZQ3 224 aa13.21□□□□□ -0.29
LSP1-204ENST00000406638 A0A0G2JNJ9 132 aa13.21□□□□□ -0.3
LSP1-204ENST00000406638 CD5LO43866 347 aa13.21□□□□□ -0.3
LSP1-204ENST00000406638 HOXC12P31275 282 aa13.21□□□□□ -0.3
LSP1-204ENST00000406638 GPR12P47775 334 aa13.21□□□□□ -0.3
LSP1-204ENST00000406638 FABP6P51161 128 aa13.21□□□□□ -0.3
LSP1-204ENST00000406638 WIPF2Q8TF74 440 aaPredicted RBP13.21□□□□□ -0.3
LSP1-204ENST00000406638 Q9UFV3 132 aa13.21□□□□□ -0.3
LSP1-204ENST00000406638 TIMM8BQ9Y5J9 83 aaPredicted RBP13.21□□□□□ -0.3
LSP1-204ENST00000406638 IGLC1P0CG04 106 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 MYOD1P15172 320 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 FNDC4Q9H6D8 234 aaPredicted RBP13.2□□□□□ -0.3
LSP1-204ENST00000406638 GAGE10A6NGK3 116 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 HIGD1CA8MV81 97 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 VWC2LB2RUY7 222 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 HSBP1L1C9JCN9 74 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 ERVK-16P61578 105 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 RPL39P5Q59GN2 51 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 KLF14Q8TD94 323 aaPredicted RBP13.2□□□□□ -0.3
LSP1-204ENST00000406638 CHRDL1Q9BU40 450 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 TMEM140Q9NV12 185 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 PEF1Q9UBV8 284 aaKnown RBP13.2□□□□□ -0.3
LSP1-204ENST00000406638 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 ITPR1Q14643 2758 aa13.2□□□□□ -0.3
LSP1-204ENST00000406638 IGHV1-24A0A0C4DH33 117 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 C7orf71A4D174 169 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 PPIAL4DF5H284 164 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 LEPROTL1O95214 131 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 SSX8Q7RTT4 187 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 SLC25A10Q9UBX3 287 aaPredicted RBP13.19□□□□□ -0.3
LSP1-204ENST00000406638 DUSP13Q9UII6 198 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 SLC25A15Q9Y619 301 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 CRXO43186 299 aaPredicted RBP13.19□□□□□ -0.3
LSP1-204ENST00000406638 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 FER1L6-AS1Q8NA97 138 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 NAA38Q9BRA0 125 aaKnown RBP13.19□□□□□ -0.3
LSP1-204ENST00000406638 SCRT2Q9NQ03 307 aa13.19□□□□□ -0.3
LSP1-204ENST00000406638 FAM231BA6NCW3 169 aa13.18□□□□□ -0.3
LSP1-204ENST00000406638 OR1B1Q8NGR6 318 aa13.18□□□□□ -0.3
LSP1-204ENST00000406638 MBD6Q96DN6 1003 aa13.18□□□□□ -0.3
LSP1-204ENST00000406638 OR2V2Q96R30 315 aa13.18□□□□□ -0.3
LSP1-204ENST00000406638 M0R1B8 84 aa13.18□□□□□ -0.3
LSP1-204ENST00000406638 UQCRFS1P47985 274 aa13.18□□□□□ -0.3
LSP1-204ENST00000406638 RASL11AQ6T310 242 aa13.18□□□□□ -0.3
LSP1-204ENST00000406638 ZNF835Q9Y2P0 537 aa13.18□□□□□ -0.3
LSP1-204ENST00000406638 PLCE1Q9P212 2302 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 IGKV1OR2-108A0A075B7D4 117 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 TRAV5A0A0B4J249 113 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 GOSR1O95249 250 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 ZNF138P52744 262 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 SGK494Q96LW2 274 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 TNCP24821 2201 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 POLEQ07864 2286 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 OR2J3O76001 311 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 GPR183P32249 361 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 EDDM3AQ14507 147 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 MLANAQ16655 118 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 MORN5Q5VZ52 161 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 LHFPL4Q7Z7J7 247 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 TMEM191AQ9H0A3 160 aa13.17□□□□□ -0.3
LSP1-204ENST00000406638 J3QR06 171 aa13.16□□□□□ -0.3
LSP1-204ENST00000406638 PRRG2O14669 202 aa13.16□□□□□ -0.3
LSP1-204ENST00000406638 APOA2P02652 100 aa13.16□□□□□ -0.3
LSP1-204ENST00000406638 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
LSP1-204ENST00000406638 GRAMD2BQ96HH9 432 aa13.16□□□□□ -0.3
LSP1-204ENST00000406638 GNG12Q9UBI6 72 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms