RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PITX3O75364 302 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 CD5P06127 495 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 SLC25A4P12235 298 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 NPPCP23582 126 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 NPY1RP25929 384 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 BMI1P35226 326 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-203ENST00000400772 SRPXP78539 464 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 Q6ZWC4 215 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 WFDC3Q8IUB2 231 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 KIR2DL5AQ8N109 375 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 OR1S2Q8NGQ3 325 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 KIR2DL5BQ8NHK3 375 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 DTD1Q8TEA8 209 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 SLC25A21Q9BQT8 299 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-203ENST00000400772 MAP6D1Q9H9H5 199 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 U3KQ87 197 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 U3KQE9 123 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 UBE2CO00762 179 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 SPRY2O43597 315 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 RBMS2Q15434 407 aaKnown RBP11.69□□□□□ -0.54
ATG4B-203ENST00000400772 BAK1Q16611 211 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 DEFB135Q30KP9 77 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 FAM24BQ8N5W8 94 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 LRTM2Q8N967 370 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 NPIPB3Q92617 1050 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 METTL26Q96S19 204 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
ATG4B-203ENST00000400772 TRAV2A0A0B4J234 112 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 LCE6AA0A183 80 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 DUXBA0A1W2PPF3 345 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 SCGB2A1O75556 95 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 SFT2D2O95562 160 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 IFNA10P01566 189 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 OR10J1P30954 320 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 YPEL3P61236 119 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-203ENST00000400772 PPP1R1AQ13522 171 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 NOXA1Q86UR1 476 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 STPG3Q8N7X2 389 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 IL17DQ8TAD2 202 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 RNF183Q96D59 192 aa11.68□□□□□ -0.54
ATG4B-203ENST00000400772 SDHCQ99643 169 aaPredicted RBP11.68□□□□□ -0.54
ATG4B-203ENST00000400772 A0A1W2PS18 150 aa11.67□□□□□ -0.54
ATG4B-203ENST00000400772 DNASE2O00115 360 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-203ENST00000400772 VAMP1P23763 118 aa11.67□□□□□ -0.54
ATG4B-203ENST00000400772 RPL11P62913 178 aaKnown RBP11.67□□□□□ -0.54
ATG4B-203ENST00000400772 EWSR1Q01844 656 aaKnown RBP eCLIP11.67□□□□□ -0.54
ATG4B-203ENST00000400772 SPANXN2Q5MJ10 180 aa11.67□□□□□ -0.54
ATG4B-203ENST00000400772 OR1S1Q8NH92 325 aa11.67□□□□□ -0.54
ATG4B-203ENST00000400772 Q8WTZ3 238 aa11.67□□□□□ -0.54
ATG4B-203ENST00000400772 TMEM231Q9H6L2 316 aa11.67□□□□□ -0.54
ATG4B-203ENST00000400772 P2RY1P47900 373 aa11.66□□□□□ -0.54
ATG4B-203ENST00000400772 DEFB131AP59861 70 aa11.66□□□□□ -0.54
ATG4B-203ENST00000400772 USF2Q15853 346 aaPredicted RBP11.66□□□□□ -0.54
ATG4B-203ENST00000400772 ACY3Q96HD9 319 aa11.66□□□□□ -0.54
ATG4B-203ENST00000400772 CSTL1Q9H114 145 aa11.66□□□□□ -0.54
ATG4B-203ENST00000400772 A0A0J9YWU9 116 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 K7EQG2 157 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 TOMM40O96008 361 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 SLC25A6P12236 298 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 C16orf54Q6UWD8 224 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 LYG2Q86SG7 212 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 CENPSQ8N2Z9 138 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 DCANP1Q8TF63 244 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
ATG4B-203ENST00000400772 IGKV1D-37A0A075B6S9 117 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 PIGBOS1A0A0B4J2F0 54 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 IFNA4P05014 189 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 IL4P05112 153 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 HNRNPCP07910 306 aaKnown RBP eCLIP11.64□□□□□ -0.557e-14■■□□□ 12
ATG4B-203ENST00000400772 RD3LP0DJH9 198 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 GPX4P36969 197 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-203ENST00000400772 ATP5IP56385 69 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-203ENST00000400772 GAMTQ14353 236 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 STXBP6Q8NFX7 210 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 FLVCR2Q9UPI3 526 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 TMED3Q9Y3Q3 217 aa11.64□□□□□ -0.55
ATG4B-203ENST00000400772 MPTX1A8MV57 137 aa11.63□□□□□ -0.55
ATG4B-203ENST00000400772 NDUFB6O95139 128 aa11.63□□□□□ -0.55
ATG4B-203ENST00000400772 HOXB5P09067 269 aa11.63□□□□□ -0.55
ATG4B-203ENST00000400772 IAPPP10997 89 aa11.63□□□□□ -0.55
ATG4B-203ENST00000400772 PSG1P11464 419 aa11.63□□□□□ -0.55
ATG4B-203ENST00000400772 BTCP35070 178 aa11.63□□□□□ -0.55
ATG4B-203ENST00000400772 NARS2Q96I59 477 aaKnown RBP11.63□□□□□ -0.55
ATG4B-203ENST00000400772 C9orf170A2RU37 121 aa11.62□□□□□ -0.55
ATG4B-203ENST00000400772 NAP1L6A6NFF2 107 aa11.62□□□□□ -0.55
ATG4B-203ENST00000400772 FAM90A26D6RGX4 464 aa11.62□□□□□ -0.55
ATG4B-203ENST00000400772 BUB3O43684 328 aa11.62□□□□□ -0.55
ATG4B-203ENST00000400772 UBE2MP61081 183 aaKnown RBP11.62□□□□□ -0.55
ATG4B-203ENST00000400772 GGNBP1Q5YKI7 109 aa11.62□□□□□ -0.55
ATG4B-203ENST00000400772 TRIQKQ629K1 86 aa11.62□□□□□ -0.55
ATG4B-203ENST00000400772 GRAMD2BQ96HH9 432 aa11.62□□□□□ -0.55
ATG4B-203ENST00000400772 MAGT1Q9H0U3 335 aa11.62□□□□□ -0.55
ATG4B-203ENST00000400772 ALMS1Q8TCU4 4167 aa11.61□□□□□ -0.55
ATG4B-203ENST00000400772 LINC00854A0A1B0GVQ3 168 aa11.61□□□□□ -0.55
ATG4B-203ENST00000400772 INPP1P49441 399 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms