RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 IGHV2OR16-5A0A0B4J2B6 119 aa13.41□□□□□ -0.26
ITSN1-209ENST00000399352 D6R8Y8 96 aa13.41□□□□□ -0.26
ITSN1-209ENST00000399352 LHX2P50458 406 aa13.41□□□□□ -0.26
ITSN1-209ENST00000399352 HIST1H4AP62805 103 aaKnown RBP13.41□□□□□ -0.26
ITSN1-209ENST00000399352 MORN2Q502X0 79 aa13.41□□□□□ -0.26
ITSN1-209ENST00000399352 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
ITSN1-209ENST00000399352 MCRIP2Q9BUT9 160 aaKnown RBP13.4□□□□□ -0.26
ITSN1-209ENST00000399352 GAGE12BA1L429 117 aa13.4□□□□□ -0.26
ITSN1-209ENST00000399352 ZNF497Q6ZNH5 498 aa13.4□□□□□ -0.26
ITSN1-209ENST00000399352 NEUROG3Q9Y4Z2 214 aa13.4□□□□□ -0.26
ITSN1-209ENST00000399352 LINC00312Q9Y6C7 94 aa13.4□□□□□ -0.26
ITSN1-209ENST00000399352 TMEM42Q69YG0 159 aa13.4□□□□□ -0.26
ITSN1-209ENST00000399352 RTN4RL2Q86UN3 420 aa13.4□□□□□ -0.26
ITSN1-209ENST00000399352 RPP25LQ8N5L8 163 aaKnown RBP13.4□□□□□ -0.26
ITSN1-209ENST00000399352 YPEL1O60688 119 aa13.4□□□□□ -0.26
ITSN1-209ENST00000399352 YPEL2Q96QA6 119 aa13.4□□□□□ -0.26
ITSN1-209ENST00000399352 TDGF1P3P51864 188 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 OR10W1Q8NGF6 305 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 GGTLC1Q9BX51 225 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 FOXH1O75593 365 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 LINC00271P0C7V0 271 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 APOBEC3AP31941 199 aaPredicted RBP13.39□□□□□ -0.27
ITSN1-209ENST00000399352 KIR3DS1Q14943 382 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 PVRIGQ6DKI7 326 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 WFDC12Q8WWY7 111 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 DLEC1Q9Y238 1755 aa13.39□□□□□ -0.27
ITSN1-209ENST00000399352 HTN3P15516 51 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 TMEM249Q2WGJ8 235 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 IQCF6A8MYZ5 107 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 DUTP33316 252 aaKnown RBP13.38□□□□□ -0.27
ITSN1-209ENST00000399352 GAS1P54826 345 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 SLC50A1Q9BRV3 221 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 MYO16Q9Y6X6 1858 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 PRCDQ00LT1 54 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 STPG1Q5TH74 334 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 ADCYAP1P18509 176 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 MALP21145 153 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 IGHV1-2P23083 117 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 AGMATQ9BSE5 352 aa13.38□□□□□ -0.27
ITSN1-209ENST00000399352 LYPD3O95274 346 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 LAGE3Q14657 143 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 GTF3AQ92664 365 aaKnown RBP13.37□□□□□ -0.27
ITSN1-209ENST00000399352 ZNF48Q96MX3 618 aaPredicted RBP13.37□□□□□ -0.27
ITSN1-209ENST00000399352 TRAV1-1A0A0B4J248 108 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 A0A1B0GW64 132 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 NBR2O15453 112 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 ZNF138P52744 262 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 SSBP2P81877 361 aaPredicted RBP13.37□□□□□ -0.27
ITSN1-209ENST00000399352 SCRT1Q9BWW7 348 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 GFRA3O60609 400 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 TNFRSF6BO95407 300 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 CCL1P22362 96 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 ZNF562Q6V9R5 426 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 FDCSPQ8NFU4 85 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 SMPXQ9UHP9 88 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 GLI3P10071 1580 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 SDK2Q58EX2 2172 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 LHFPL1Q86WI0 220 aa13.37□□□□□ -0.27
ITSN1-209ENST00000399352 PF4P02776 101 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 SPINK8P0C7L1 97 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 NRN1LQ496H8 165 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 EXOC3-AS1Q8N2X6 119 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 RALGAPA1Q6GYQ0 2036 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 IGKV1-12A0A0C4DH73 117 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 IGKV1D-12P01611 117 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 KIF26BQ2KJY2 2108 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 IGKV2-40A0A087WW87 121 aaPredicted RBP13.36□□□□□ -0.27
ITSN1-209ENST00000399352 IGKV2D-40P01614 121 aaPredicted RBP13.36□□□□□ -0.27
ITSN1-209ENST00000399352 SLC25A48Q6ZT89 311 aaKnown RBP13.36□□□□□ -0.27
ITSN1-209ENST00000399352 EDA2RQ9HAV5 297 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 COX6B1P14854 86 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 BSPH1Q075Z2 132 aa13.36□□□□□ -0.27
ITSN1-209ENST00000399352 GATD1Q8NB37 220 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 DLX4Q92988 240 aaPredicted RBP13.35□□□□□ -0.27
ITSN1-209ENST00000399352 SYS1-DBNDD2H3BUS1 97 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 C10orf55Q5SWW7 151 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 C2orf82Q6UX34 121 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 TCRAP04437 139 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 MST1P26927 711 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 CHD5Q8TDI0 1954 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 ADAMTSL5Q6ZMM2 481 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 MPDZO75970 2070 aa13.35□□□□□ -0.27
ITSN1-209ENST00000399352 TMEM238C9JI98 176 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 F2Z2F3 143 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 LINC00158P58513 81 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 LYZL1Q6UWQ5 148 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 FAM90A1Q86YD7 464 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 IMMP1LQ96LU5 166 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-209ENST00000399352 PMS2P5A8MQ11 134 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 LCNL1Q6ZST4 164 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 NUP35Q8NFH5 326 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 QSER1Q2KHR3 1735 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 ZDBF2Q9HCK1 2354 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 KLF17Q5JT82 389 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms