RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 FDCSPQ8NFU4 85 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 ITLN1Q8WWA0 313 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 LINC01587Q99440 93 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 TM2D1Q9BX74 207 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 PRDM6Q9NQX0 595 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 MRPS18AQ9NVS2 196 aaKnown RBP2.28□□□□□ -2.04
CHD9-202ENST00000398510 FBLN5Q9UBX5 448 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 TLN1Q9Y490 2541 aaKnown RBP2.28□□□□□ -2.04
CHD9-202ENST00000398510 SRRM5B3KS81 715 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 DGCR2P98153 550 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 FOXE3Q13461 319 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 KLHL30-AS1Q8NEE0 82 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 TRGV9Q99603 122 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 C20orf144Q9BQM9 153 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CCDC168Q8NDH2 2452 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 RRHO14718 337 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 IL11P20809 199 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 ZNF137PP52743 207 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 FABP5Q01469 135 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 ZNF124Q15973 351 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 C4orf48Q5BLP8 95 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 C1orf100Q5SVJ3 147 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 DNLZQ5SXM8 178 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 HEPN1Q6WQI6 88 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 ZNF497Q6ZNH5 498 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 PLSCR4Q9NRQ2 329 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 C5orf63A6NC05 138 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CD7P09564 240 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 RND2P52198 227 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 EFNB1P98172 346 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 DMKNQ6E0U4 476 aaPredicted RBP2.28□□□□□ -2.04
CHD9-202ENST00000398510 WDR82Q6UXN9 313 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 TEX43Q6ZNM6 134 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CCL13Q99616 98 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 SDHCQ99643 169 aaPredicted RBP2.28□□□□□ -2.04
CHD9-202ENST00000398510 TCF19Q9Y242 345 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 LINC01548A6NM66 108 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CST7O76096 145 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 MSMBP08118 114 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CELA3BP08861 270 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 CRYGSP22914 178 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 EWSR1Q01844 656 aaKnown RBP eCLIP2.28□□□□□ -2.04
CHD9-202ENST00000398510 LAGE3Q14657 143 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 PPP1R32Q7Z5V6 425 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 HMGN2P46Q86SG4 172 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 ALG14Q96F25 216 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 ZNF414Q96IQ9 312 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 IMMP1LQ96LU5 166 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 PLA2G2FQ9BZM2 168 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 PLSCR3Q9NRY6 295 aa2.28□□□□□ -2.04
CHD9-202ENST00000398510 TRBV5-5A0A0J9YX44 114 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 LOC389332A0A1B0GUA5 103 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 A0A1W2PPV9 198 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 RBAKDNA6NC62 111 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 C22orf46C9J442 243 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 NTN3O00634 580 aaPredicted RBP2.28□□□□□ -2.05
CHD9-202ENST00000398510 SBK3P0C264 359 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 FCGR2BP31994 310 aaPredicted RBP2.28□□□□□ -2.05
CHD9-202ENST00000398510 PSG4Q00888 419 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 ANKRD39Q53RE8 183 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 COL5A1-AS1Q5SY13 56 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 ASPHD2Q6ICH7 369 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 BCL6BQ8N143 479 aaPredicted RBP2.28□□□□□ -2.05
CHD9-202ENST00000398510 CRIM1Q9NZV1 1036 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 COL27A1Q8IZC6 1860 aaPredicted RBP2.28□□□□□ -2.05
CHD9-202ENST00000398510 KIR2DL5BA0A0G2JN68 375 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 KIR2DL5BA0A0G2JPC4 375 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 FABP5P3A8MUU1 101 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 H3BP45 60 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 PYCARD-AS1I3L0S3 204 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 FCMRO60667 390 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 PFN1P07737 140 aaKnown RBP2.28□□□□□ -2.05
CHD9-202ENST00000398510 CCL4P13236 92 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 ZFP36L1Q07352 338 aaKnown RBP2.28□□□□□ -2.05
CHD9-202ENST00000398510 ATXN8Q156A1 80 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 SLC25A47Q6Q0C1 308 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 CLEC9AQ6UXN8 241 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 TRPT1Q86TN4 253 aaKnown RBP2.28□□□□□ -2.05
CHD9-202ENST00000398510 KIR2DL5AQ8N109 375 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 MESP1Q9BRJ9 268 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 FBXL7Q9UJT9 491 aa2.28□□□□□ -2.05
CHD9-202ENST00000398510 TRBV25-1A0A075B6N4 114 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 A0A1W2PRE2 83 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 RNF222A6NCQ9 220 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 FAM231BA6NCW3 169 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 ZNF25P17030 456 aaPredicted RBP2.27□□□□□ -2.05
CHD9-202ENST00000398510 TDRG1Q3Y452 100 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 NFE4Q86UQ8 179 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 FER1L6-AS1Q8NA97 138 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 TMEM141Q96I45 108 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 ISG20L2Q9H9L3 353 aaKnown RBP2.27□□□□□ -2.05
CHD9-202ENST00000398510 ADARB2-AS1A8MUL3 147 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 HLA-DQB1P01920 261 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 CFHR2P36980 270 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 Q0VG73 95 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 C3AR1Q16581 482 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 LINC00303Q3SY05 128 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 Q6ZS49 121 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 CYP2G1PQ6ZSU1 146 aa2.27□□□□□ -2.05
CHD9-202ENST00000398510 IGHV3OR16-12A0A075B7B8 117 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms