RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SAA2-SAA4A0A096LPE2 208 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 A0A1B0GUS0 222 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 A8MWL6 223 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 TMPRSS2O15393 492 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 IGHV2-70P01814 119 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 AMBPP02760 352 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 SAA2P0DJI9 122 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-202ENST00000398417 OPRK1P41145 380 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 C10orf55Q5SWW7 151 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 GFRALQ6UXV0 394 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 OR8I2Q8N0Y5 310 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 DDTP30046 118 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 TIMP3P35625 211 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 COMPP49747 757 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-202ENST00000398417 ERHP84090 104 aaKnown RBP4.07□□□□□ -1.76
SMAD4-202ENST00000398417 UTF1Q5T230 341 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 OR4C13Q8NGP0 309 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 DPH3P1Q9H4G8 78 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 UFC1Q9Y3C8 167 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 TRAV1-1A0A0B4J248 108 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 UPK2O00526 184 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 IGHV1-46P01743 117 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 CT45A10P0DMU9 189 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 NPPCP23582 126 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 STPG3Q8N7X2 389 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 MRPL18Q9H0U6 180 aaKnown RBP4.07□□□□□ -1.76
SMAD4-202ENST00000398417 IFI27L2Q9H2X8 130 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 MBNL3Q9NUK0 354 aaKnown RBP4.07□□□□□ -1.76
SMAD4-202ENST00000398417 PSMB11A5LHX3 300 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 AHRRA9YTQ3 701 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF253O75346 499 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 RBP4P02753 201 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 RND2P52198 227 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 HCP5Q6MZN7 132 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 SNRNP40Q96DI7 357 aaKnown RBP4.07□□□□□ -1.76
SMAD4-202ENST00000398417 FBXL15Q9H469 300 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF430Q9H8G1 570 aaPredicted RBP4.07□□□□□ -1.76
SMAD4-202ENST00000398417 CBLN4Q9NTU7 201 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 SLC25A15Q9Y619 301 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 GNG4P50150 75 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 BRWD1-AS2P59051 145 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 BPIFB3P59826 476 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 PAFAH1B2P68402 229 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 TICRRQ7Z2Z1 1910 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 MMD2Q8IY49 270 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 NPIPB3Q92617 1050 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 ADTRPQ96IZ2 230 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 TANC1Q9C0D5 1861 aa4.07□□□□□ -1.76
SMAD4-202ENST00000398417 RBMY1BA6NDE4 496 aaKnown RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 RBMY1EA6NEQ0 496 aaKnown RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 K7EM74 188 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 RBMY1DP0C7P1 496 aaKnown RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 RBMY1A1P0DJD3 496 aaKnown RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 DOLPP1Q86YN1 238 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 GAFA1Q96PS6 74 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 HIST1H2BLQ99880 126 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 TRBV24-1A0A075B6N3 115 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 GCSHP23434 173 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 CCKARP32238 428 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 ASPHD1Q5U4P2 390 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM167BQ9NRX6 74 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 SLC25A10Q9UBX3 287 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM250H0YL14 139 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 OSR1Q8TAX0 266 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 HSPB9Q9BQS6 159 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 FRYQ5TBA9 3013 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 DLL1O00548 723 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 SUB1P53999 127 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 MSMPQ1L6U9 139 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 C5orf47Q569G3 176 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 C10orf113Q5VZT2 155 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 ATG101Q9BSB4 218 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 SPXQ9BT56 116 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 GGTLC1Q9BX51 225 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 SPG11Q96JI7 2443 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 KBTBD11-OT1A0A1B0GTJ5 212 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 PMS2P5A8MQ11 134 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 EIF4EBP3O60516 100 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 TNFRSF1AP19438 455 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 CBLN1P23435 193 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 LYZP61626 148 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 RANP62826 216 aaKnown RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 UNQ6494/PRO21346Q6UXR6 183 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 C1orf229Q6ZS94 237 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 FAM90A1Q86YD7 464 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 BOD1L2Q8IYS8 172 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 TMEM256Q8N2U0 113 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 OR2K2Q8NGT1 345 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 FLYWCH2Q96CP2 140 aaKnown RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 PARD6GQ9BYG4 376 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 PRO3102Q9H379 93 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 PGPA6NDG6 321 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 LYNX1G3V0Z9 82 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 THBDP07204 575 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 SAA1P0DJI8 122 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 LYNX1P0DP58 116 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 VDAC2P45880 294 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-202ENST00000398417 ZNF134P52741 427 aa4.06□□□□□ -1.76
SMAD4-202ENST00000398417 IL36BQ9NZH7 164 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms