RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 Q6ZRM9 215 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 SNCGO76070 127 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 CIARTQ8N365 385 aaPredicted RBP13.55□□□□□ -0.24
SCN3B-202ENST00000392770 CD5P06127 495 aa13.54□□□□□ -0.24
SCN3B-202ENST00000392770 PEMTQ9UBM1 199 aa13.54□□□□□ -0.24
SCN3B-202ENST00000392770 TRBV20OR9-2A0A075B6H5 130 aa13.54□□□□□ -0.24
SCN3B-202ENST00000392770 K7EM74 188 aa13.54□□□□□ -0.24
SCN3B-202ENST00000392770 FOXA3P55318 350 aaPredicted RBP13.54□□□□□ -0.24
SCN3B-202ENST00000392770 OR10AG1Q8NH19 301 aa13.54□□□□□ -0.24
SCN3B-202ENST00000392770 ITLN2Q8WWU7 325 aaPredicted RBP13.54□□□□□ -0.24
SCN3B-202ENST00000392770 IGKV1-16P04430 117 aa13.54□□□□□ -0.24
SCN3B-202ENST00000392770 PGPEP1LA6NFU8 196 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 ERVK11-1P61568 191 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 SLC50A1Q9BRV3 221 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 B4DSR2 109 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 SIGLEC9Q9Y336 463 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 FAM186AA6NE01 2351 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 TRAV9-1A0A075B6T8 112 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 C15orf62A8K5M9 175 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 C9JCJ5 164 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 M0R381 172 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 STAG3L2P0CL84 134 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 STAG3L3P0CL85 134 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 PAX8Q06710 450 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 SMAGPQ0VAQ4 97 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 SRSF9Q13242 221 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCN3B-202ENST00000392770 ZNF418Q8TF45 676 aaPredicted RBP13.53□□□□□ -0.24
SCN3B-202ENST00000392770 DCAF16Q9NXF7 216 aa13.53□□□□□ -0.24
SCN3B-202ENST00000392770 FOLR2P14207 255 aa13.52□□□□□ -0.24
SCN3B-202ENST00000392770 DLX1P56177 255 aa13.52□□□□□ -0.24
SCN3B-202ENST00000392770 PMCHL1Q16048 86 aa13.52□□□□□ -0.24
SCN3B-202ENST00000392770 C5orf64Q2M2E5 130 aa13.52□□□□□ -0.24
SCN3B-202ENST00000392770 C15orf32Q32M92 178 aa13.52□□□□□ -0.24
SCN3B-202ENST00000392770 HIGD1CA8MV81 97 aa13.52□□□□□ -0.24
SCN3B-202ENST00000392770 ZNF502Q8TBZ5 544 aa13.52□□□□□ -0.24
SCN3B-202ENST00000392770 SEPSECSQ9HD40 501 aaKnown RBP13.52□□□□□ -0.24
SCN3B-202ENST00000392770 TBL2Q9Y4P3 447 aaKnown RBP13.52□□□□□ -0.24
SCN3B-202ENST00000392770 A0A1B0GUT8 65 aa13.52□□□□□ -0.25
SCN3B-202ENST00000392770 CEACAM4O75871 244 aa13.52□□□□□ -0.25
SCN3B-202ENST00000392770 PRB4P10163 310 aaPredicted RBP13.52□□□□□ -0.25
SCN3B-202ENST00000392770 KIR3DL3Q8N743 410 aa13.52□□□□□ -0.25
SCN3B-202ENST00000392770 A0A1W2PNU3 283 aaPredicted RBP13.52□□□□□ -0.25
SCN3B-202ENST00000392770 PSG1P11464 419 aa13.52□□□□□ -0.25
SCN3B-202ENST00000392770 ITGB1BP1O14713 200 aa13.52□□□□□ -0.25
SCN3B-202ENST00000392770 IGFL2Q6UWQ7 119 aa13.52□□□□□ -0.25
SCN3B-202ENST00000392770 OCC1Q8TAD7 63 aa13.52□□□□□ -0.25
SCN3B-202ENST00000392770 KLK15Q9H2R5 256 aa13.52□□□□□ -0.25
SCN3B-202ENST00000392770 SOX21Q9Y651 276 aaPredicted RBP13.52□□□□□ -0.25
SCN3B-202ENST00000392770 FER1L6-AS1Q8NA97 138 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 GLMPQ8WWB7 406 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 PRELID3AQ96N28 172 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 TUBA4BQ9H853 241 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 C17orf58Q2M2W7 97 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 IGF2-ASQ6U949 168 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 TCF23Q7RTU1 214 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 LIME1Q9H400 295 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 F11RQ9Y624 299 aaKnown RBP13.51□□□□□ -0.25
SCN3B-202ENST00000392770 TRAV1-1A0A0B4J248 108 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 RPLP1P05386 114 aaKnown RBP13.51□□□□□ -0.25
SCN3B-202ENST00000392770 TRGV9Q99603 122 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 AMMECR1LQ6DCA0 310 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 REG4Q9BYZ8 158 aa13.51□□□□□ -0.25
SCN3B-202ENST00000392770 A0A1B0GW64 132 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 KLF17Q5JT82 389 aaPredicted RBP13.5□□□□□ -0.25
SCN3B-202ENST00000392770 RPP25LQ8N5L8 163 aaKnown RBP13.5□□□□□ -0.25
SCN3B-202ENST00000392770 SCRT1Q9BWW7 348 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 A0A1B0GWJ7 208 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 FBLL1A6NHQ2 334 aaKnown RBP13.5□□□□□ -0.25
SCN3B-202ENST00000392770 OR1N2Q8NGR9 330 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 SLC25A39Q9BZJ4 359 aaPredicted RBP13.5□□□□□ -0.25
SCN3B-202ENST00000392770 PSG8Q9UQ74 426 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 A6NNC1 897 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 H3BUX3 64 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 PSMB2P49721 201 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 DUX3Q96PT4 197 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 A6NDN8 102 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 SIGLEC15Q6ZMC9 328 aa13.5□□□□□ -0.25
SCN3B-202ENST00000392770 WIPF3A6NGB9 483 aa13.49□□□□□ -0.25
SCN3B-202ENST00000392770 PAX1P15863 534 aa13.49□□□□□ -0.25
SCN3B-202ENST00000392770 PRO3102Q9H379 93 aa13.49□□□□□ -0.25
SCN3B-202ENST00000392770 TEX36Q5VZQ5 186 aa13.49□□□□□ -0.25
SCN3B-202ENST00000392770 Q6AWC8 147 aa13.49□□□□□ -0.25
SCN3B-202ENST00000392770 CYB5R2Q6BCY4 276 aa13.49□□□□□ -0.25
SCN3B-202ENST00000392770 RNASE2P10153 161 aaKnown RBP13.49□□□□□ -0.25
SCN3B-202ENST00000392770 RPL15P61313 204 aaKnown RBP13.49□□□□□ -0.25
SCN3B-202ENST00000392770 NUTF2P61970 127 aaKnown RBP13.49□□□□□ -0.25
SCN3B-202ENST00000392770 C1QL4Q86Z23 238 aa13.49□□□□□ -0.25
SCN3B-202ENST00000392770 PARD6GQ9BYG4 376 aaPredicted RBP13.49□□□□□ -0.25
SCN3B-202ENST00000392770 ADAMTS9Q9P2N4 1935 aa13.49□□□□□ -0.25
SCN3B-202ENST00000392770 RPL13AP40429 203 aaKnown RBP13.48□□□□□ -0.25
SCN3B-202ENST00000392770 SAMD13Q5VXD3 122 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 ATOH7Q8N100 152 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 IGLV3-9A0A075B6K5 115 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 BEND2Q8NDZ0 799 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 KCNS1Q96KK3 526 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 OSTCQ9NRP0 149 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 A0A1B0GW15 77 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 PRTN3P24158 256 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms