RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 RNF125Q96EQ8 232 aa11.65□□□□□ -0.54
PDE4D-203ENST00000340635 SRSF7Q16629 238 aaKnown RBP eCLIP11.65□□□□□ -0.55
PDE4D-203ENST00000340635 NHSQ6T4R5 1651 aa11.65□□□□□ -0.55
PDE4D-203ENST00000340635 OVOL1O14753 267 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 RHOGP84095 191 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 TMEM170AQ8WVE7 144 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 CFHR5Q9BXR6 569 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 ASPHD2Q6ICH7 369 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 PLXND1Q9Y4D7 1925 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 hADV29S1A0JD25 119 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 TCRAP04437 139 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 IMMP1LQ96LU5 166 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 SRXN1Q9BYN0 137 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 ABCA3Q99758 1704 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 SOCS3O14543 225 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 THAP8Q8NA92 274 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 ZNF501Q96CX3 271 aaPredicted RBP11.64□□□□□ -0.55
PDE4D-203ENST00000340635 ZNF561-AS1K7EIQ3 104 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 PAX8Q06710 450 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 SLC25A28Q96A46 364 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 HEATR5AQ86XA9 2040 aa11.64□□□□□ -0.55
PDE4D-203ENST00000340635 SRP19P09132 144 aaKnown RBP11.63□□□□□ -0.55
PDE4D-203ENST00000340635 TMEM258P61165 79 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 ZNF876PQ49A33 203 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 NPIPB13A6NJU9 1138 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 Q6ZT83 130 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 ABCA4P78363 2273 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 GATA2P23769 480 aaPredicted RBP11.63□□□□□ -0.55
PDE4D-203ENST00000340635 ZNF236Q9UL36 1845 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 CHKB-CPT1BH3BT56 60 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 IGHV3-53P01767 116 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 SPINK8P0C7L1 97 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 PRB3Q04118 309 aaPredicted RBP11.63□□□□□ -0.55
PDE4D-203ENST00000340635 CT83Q5H943 113 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 GTSF1LQ9H1H1 148 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 MYMXA0A1B0GTQ4 84 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 ZNF708P17019 499 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 ZP1P60852 638 aa11.63□□□□□ -0.55
PDE4D-203ENST00000340635 UMODP07911 640 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 FOXL2P58012 376 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 ZXDCQ2QGD7 858 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-203ENST00000340635 IGHG3P01860 377 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 IFITM2Q01629 132 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 C8orf82Q6P1X6 216 aaPredicted RBP11.62□□□□□ -0.55
PDE4D-203ENST00000340635 C1orf159Q96HA4 380 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 LRRK1Q38SD2 2015 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 DOCK4Q8N1I0 1966 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 FOXS1O43638 330 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 MMP23AO75900 390 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 CDCP2Q5VXM1 449 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 RASL11AQ6T310 242 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 FAM90A2PQ658T7 463 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 OR10W1Q8NGF6 305 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 TRBV5-3A0A0A0MS03 114 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 A0A1W2PPV9 198 aa11.62□□□□□ -0.55
PDE4D-203ENST00000340635 LSM4Q9Y4Z0 139 aaKnown RBP11.62□□□□□ -0.55
PDE4D-203ENST00000340635 ZNF474Q6S9Z5 364 aaPredicted RBP11.61□□□□□ -0.55
PDE4D-203ENST00000340635 GNB1LQ9BYB4 327 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 PSG8Q9UQ74 426 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDE4D-203ENST00000340635 TCF20Q9UGU0 1960 aaKnown RBP11.61□□□□□ -0.55
PDE4D-203ENST00000340635 LHX2P50458 406 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 DEFB104AQ8WTQ1 72 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 LOC105371267A0A1B0GV96 52 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 C17orf98A8MV24 154 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 ANXA2RQ3ZCQ2 193 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 DSCR8Q96T75 97 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 SCN4AP35499 1836 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 PEBP1P30086 187 aaKnown RBP11.61□□□□□ -0.55
PDE4D-203ENST00000340635 PRIMA1Q86XR5 153 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 BCL6BQ8N143 479 aaPredicted RBP11.61□□□□□ -0.55
PDE4D-203ENST00000340635 LINC00312Q9Y6C7 94 aa11.61□□□□□ -0.55
PDE4D-203ENST00000340635 TRBV5-7A0A0A0MS05 114 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 CCL20P78556 96 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 TMEM52Q8NDY8 209 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 PAPPA2Q9BXP8 1791 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 CLPSP04118 112 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 TET1Q8NFU7 2136 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 TAF1LQ8IZX4 1826 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 UBL5Q9BZL1 73 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 CENPVL1A0A0U1RR11 272 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 C15orf61A6NNL5 157 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 TRACP01848 142 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 WNT2P09544 360 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 BHLHA9Q7RTU4 235 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 UBR3Q6ZT12 1888 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 CNOT1A5YKK6 2376 aaKnown RBP11.6□□□□□ -0.55
PDE4D-203ENST00000340635 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
PDE4D-203ENST00000340635 FAM216BQ8N7L0 139 aa11.59□□□□□ -0.55
PDE4D-203ENST00000340635 EGR2P11161 476 aaPredicted RBP11.59□□□□□ -0.55
PDE4D-203ENST00000340635 HELZP42694 1942 aaKnown RBP11.59□□□□□ -0.55
PDE4D-203ENST00000340635 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
PDE4D-203ENST00000340635 J3QW42 95 aa11.59□□□□□ -0.55
PDE4D-203ENST00000340635 KIAA1551Q9HCM1 1747 aa11.59□□□□□ -0.55
PDE4D-203ENST00000340635 BRWD3Q6RI45 1802 aa11.59□□□□□ -0.55
PDE4D-203ENST00000340635 C12orf77C9JDV5 145 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms