RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 NPPCP23582 126 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 PPIFP30405 207 aaKnown RBP12.97□□□□□ -0.33
USP43-201ENST00000285199 B3GALT5-AS1P59052 145 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 TRIP6Q15654 476 aaKnown RBP12.97□□□□□ -0.33
USP43-201ENST00000285199 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 TMEM160Q9NX00 188 aa12.97□□□□□ -0.33
USP43-201ENST00000285199 TYMSP04818 313 aa12.96□□□□□ -0.33
USP43-201ENST00000285199 LINC00614P0C842 121 aa12.96□□□□□ -0.33
USP43-201ENST00000285199 GPR183P32249 361 aa12.96□□□□□ -0.33
USP43-201ENST00000285199 A1L4Q6 167 aa12.96□□□□□ -0.33
USP43-201ENST00000285199 IL4P05112 153 aa12.96□□□□□ -0.33
USP43-201ENST00000285199 KIR2DL2P43627 348 aaPredicted RBP12.96□□□□□ -0.33
USP43-201ENST00000285199 TPTE2P1Q5T6R2 138 aa12.96□□□□□ -0.33
USP43-201ENST00000285199 OR4C13Q8NGP0 309 aa12.96□□□□□ -0.33
USP43-201ENST00000285199 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.34
USP43-201ENST00000285199 FAM181BA6NEQ2 426 aa12.96□□□□□ -0.34
USP43-201ENST00000285199 GCSAMQ8N6F7 178 aa12.96□□□□□ -0.34
USP43-201ENST00000285199 DEFB104AQ8WTQ1 72 aa12.96□□□□□ -0.34
USP43-201ENST00000285199 GPR82Q96P67 336 aa12.96□□□□□ -0.34
USP43-201ENST00000285199 FBXL15Q9H469 300 aa12.96□□□□□ -0.34
USP43-201ENST00000285199 RPP21Q9H633 154 aaKnown RBP12.96□□□□□ -0.34
USP43-201ENST00000285199 PROK2Q9HC23 129 aa12.96□□□□□ -0.34
USP43-201ENST00000285199 HTN1P15515 57 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 SLC25A33Q9BSK2 321 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 TGFAP01135 160 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 UBE2V1Q13404 147 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 CFAP54Q96N23 3096 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 CACNA1AO00555 2505 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 MGPP08493 103 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 CX3CL1P78423 397 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 CD177Q8N6Q3 437 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 NUP35Q8NFH5 326 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 ZNF414Q96IQ9 312 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 SPCS1Q9Y6A9 102 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 DSCAML1Q8TD84 2053 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 IGHV2OR16-5A0A0B4J2B6 119 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 KBTBD11-OT1A0A1B0GTJ5 212 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 OR2T8A6NH00 312 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 ECSCRQ19T08 205 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 SPANXN1Q5VSR9 72 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 CIARTQ8N365 385 aaPredicted RBP12.95□□□□□ -0.34
USP43-201ENST00000285199 SCNM1Q9BWG6 230 aa12.95□□□□□ -0.34
USP43-201ENST00000285199 FAM208BQ5VWN6 2430 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 A0A1B0GUT8 65 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 IGKV1-16P04430 117 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 TIMD4Q96H15 378 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 SFXN3Q9BWM7 321 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 XIRP2A4UGR9 3374 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 HTTP42858 3142 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 SAPCD1Q5SSQ6 148 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 C9orf106Q8NAJ2 232 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 Q9H3A6 140 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 IQCF6A8MYZ5 107 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 CACNG7P62955 275 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 EXOC3-AS1Q8N2X6 119 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 HIST1H4GQ99525 98 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 FGF23Q9GZV9 251 aaPredicted RBP12.94□□□□□ -0.34
USP43-201ENST00000285199 RALYQ9UKM9 306 aaKnown RBP12.94□□□□□ -0.34
USP43-201ENST00000285199 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
USP43-201ENST00000285199 IGLC2P0DOY2 106 aa12.93□□□□□ -0.34
USP43-201ENST00000285199 IGLC3P0DOY3 106 aa12.93□□□□□ -0.34
USP43-201ENST00000285199 SLAQ13239 276 aa12.93□□□□□ -0.34
USP43-201ENST00000285199 C20orf144Q9BQM9 153 aa12.93□□□□□ -0.34
USP43-201ENST00000285199 MLNRO43193 412 aa12.93□□□□□ -0.34
USP43-201ENST00000285199 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
USP43-201ENST00000285199 COL25A1Q9BXS0 654 aaPredicted RBP12.93□□□□□ -0.34
USP43-201ENST00000285199 SCRT1Q9BWW7 348 aa12.93□□□□□ -0.34
USP43-201ENST00000285199 SSC4DQ8WTU2 575 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 PRELID3AQ96N28 172 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 EPDR1Q9UM22 224 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 PSMB2P49721 201 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 CD69Q07108 199 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 WDR86Q86TI4 376 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 CDX2Q99626 313 aaPredicted RBP12.92□□□□□ -0.34
USP43-201ENST00000285199 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 UPK2O00526 184 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 NRN1LQ496H8 165 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 SPRR3Q9UBC9 169 aa12.92□□□□□ -0.34
USP43-201ENST00000285199 RBPJQ06330 500 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 RBPMS2Q6ZRY4 209 aaKnown RBP12.91□□□□□ -0.34
USP43-201ENST00000285199 MRPL32Q9BYC8 188 aaKnown RBP12.91□□□□□ -0.34
USP43-201ENST00000285199 FOXA2Q9Y261 457 aaPredicted RBP12.91□□□□□ -0.34
USP43-201ENST00000285199 C9orf172C9J069 976 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 LMO1P25800 156 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 SMAGPQ0VAQ4 97 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 FOXL2NBQ6ZUU3 175 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 SMIM17P0DL12 118 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 IGLL1P15814 213 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 RELQ04864 619 aaPredicted RBP12.91□□□□□ -0.34
USP43-201ENST00000285199 NHP2Q9NX24 153 aaKnown RBP12.91□□□□□ -0.34
USP43-201ENST00000285199 CHD7Q9P2D1 2997 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 TRAV9-1A0A075B6T8 112 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 C18orf32Q8TCD1 76 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 FAM168AQ92567 244 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 ACACBO00763 2458 aa12.91□□□□□ -0.34
USP43-201ENST00000285199 YPEL1O60688 119 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms