RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 IGLV3-21P80748 117 aaPredicted RBP13.4□□□□□ -0.27
CLN5-208ENST00000636183 SFTA2Q6UW10 78 aa13.4□□□□□ -0.27
CLN5-208ENST00000636183 NPCDR1Q9BY65 106 aa13.4□□□□□ -0.27
CLN5-208ENST00000636183 MYOFQ9NZM1 2061 aa13.4□□□□□ -0.27
CLN5-208ENST00000636183 FABP5P3A8MUU1 101 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 C15orf32Q32M92 178 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 TRBV5-3A0A0A0MS03 114 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
CLN5-208ENST00000636183 VWCEQ96DN2 955 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 IGHV2-26A0A0B4J1V2 119 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 RPL15P61313 204 aaKnown RBP13.39□□□□□ -0.27
CLN5-208ENST00000636183 LBHQ53QV2 105 aaPredicted RBP13.39□□□□□ -0.27
CLN5-208ENST00000636183 FOCADQ5VW36 1801 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 HBDP02042 147 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 SLC25A34Q6PIV7 304 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 NEUROG3Q9Y4Z2 214 aa13.39□□□□□ -0.27
CLN5-208ENST00000636183 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.38□□□□□ -0.27
CLN5-208ENST00000636183 SMIM13P0DJ93 91 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 TIMP3P35625 211 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 GPX4P36969 197 aaPredicted RBP13.38□□□□□ -0.27
CLN5-208ENST00000636183 PLPPR1Q8TBJ4 325 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 SCO2A0A1W2PP80 73 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 GZMBP10144 247 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 ATP5IP56385 69 aaPredicted RBP13.38□□□□□ -0.27
CLN5-208ENST00000636183 C1orf100Q5SVJ3 147 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 CKAP5Q14008 2032 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 PAX4O43316 350 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 SYNJ2BPP57105 145 aa13.38□□□□□ -0.27
CLN5-208ENST00000636183 SLC17A3O00476 420 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 MRPS18CQ9Y3D5 142 aaKnown RBP13.37□□□□□ -0.27
CLN5-208ENST00000636183 A0A1B0GUT8 65 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 HLA-DQB1P01920 261 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 SRSF4Q08170 494 aaKnown RBP13.37□□□□□ -0.27
CLN5-208ENST00000636183 TRAV2A0A0B4J234 112 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 UPK2O00526 184 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 PAX2Q02962 417 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 CR1LQ2VPA4 569 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 ASCL2Q99929 193 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 SEC16AO15027 2179 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 SIGLEC5O15389 551 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 CA7P43166 264 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 PMCHL1Q16048 86 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 RPP21Q9H633 154 aaKnown RBP13.37□□□□□ -0.27
CLN5-208ENST00000636183 DICER1Q9UPY3 1922 aaKnown RBP13.37□□□□□ -0.27
CLN5-208ENST00000636183 TGFBR3LH3BV60 316 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 GZMMP51124 257 aa13.37□□□□□ -0.27
CLN5-208ENST00000636183 PVRIGQ6DKI7 326 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 NEUROG1Q92886 237 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 TRBV5-7A0A0A0MS05 114 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 RNF182Q8N6D2 247 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 LAMTOR3Q9UHA4 124 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 THADAQ6YHU6 1953 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 IGLV3-19P01714 112 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 MORN2Q502X0 79 aa13.36□□□□□ -0.27
CLN5-208ENST00000636183 RPL36AP83881 106 aaKnown RBP13.36□□□□□ -0.27
CLN5-208ENST00000636183 GTF3AQ92664 365 aaKnown RBP13.36□□□□□ -0.27
CLN5-208ENST00000636183 RPL36ALQ969Q0 106 aaKnown RBP13.36□□□□□ -0.27
CLN5-208ENST00000636183 ZNF345Q14585 488 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 TMEM200BQ69YZ2 307 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 OTORQ9NRC9 128 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 ERVH48-1M5A8F1 160 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 CBLN1P23435 193 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 MRPS18AQ9NVS2 196 aaKnown RBP13.35□□□□□ -0.27
CLN5-208ENST00000636183 COL4A5P29400 1685 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 CIARTQ8N365 385 aaPredicted RBP13.35□□□□□ -0.27
CLN5-208ENST00000636183 OVOL1O14753 267 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 C1orf122Q6ZSJ8 110 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 C9orf62Q8N4C0 152 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 SCN8AQ9UQD0 1980 aa13.35□□□□□ -0.27
CLN5-208ENST00000636183 TPTE2P1Q5T6R2 138 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 ANAPC10Q9UM13 185 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 TYMSP04818 313 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 COL8A2P25067 703 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 C6orf226Q5I0X4 101 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 DTX1Q86Y01 620 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 SLC25A39Q9BZJ4 359 aaPredicted RBP13.34□□□□□ -0.27
CLN5-208ENST00000636183 ARAP2Q8WZ64 1704 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 ZNF561-AS1K7EIQ3 104 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 PLA2G10O15496 165 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 IL18BPO95998 194 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 RND3P61587 244 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 NAT1P18440 290 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 IRF3Q14653 427 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 COL11A1P12107 1806 aaPredicted RBP13.34□□□□□ -0.27
CLN5-208ENST00000636183 C2orf68Q2NKX9 166 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 MESP1Q9BRJ9 268 aa13.34□□□□□ -0.27
CLN5-208ENST00000636183 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.27
CLN5-208ENST00000636183 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.27
CLN5-208ENST00000636183 A0A096LPF7 62 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 OR10W1Q8NGF6 305 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 IFT22Q9H7X7 185 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 XCL2Q9UBD3 114 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 SELLP14151 372 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 PRCDQ00LT1 54 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 NTN3O00634 580 aaPredicted RBP13.33□□□□□ -0.28
CLN5-208ENST00000636183 YPEL1O60688 119 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 NAPSAO96009 420 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 LCN12Q6JVE5 192 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms