RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZNF600Q6ZNG1 722 aa15.79■□□□□ 0.12
PCDHB11-202ENST00000624887 DPM3Q9P2X0 92 aa15.79■□□□□ 0.12
PCDHB11-202ENST00000624887 IGKV1D-37A0A075B6S9 117 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 AREGP15514 252 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 PRTN3P24158 256 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 ETFRF1Q6IPR1 90 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 ZNF503Q96F45 646 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 RNF2Q99496 336 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 SLC25A33Q9BSK2 321 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 MRPL32Q9BYC8 188 aaKnown RBP15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 TCRBV4S1A1TA0A5B7 111 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 TIMM23O14925 209 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 TGOLN2O43493 480 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 CRYGCP07315 174 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 CDKN1AP38936 164 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 GPR6P46095 362 aaPredicted RBP15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 HCP5Q6MZN7 132 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 C11orf52Q96A22 123 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 FBXL15Q9H469 300 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 DNAJC4Q9NNZ3 241 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 ARHGAP32A7KAX9 2087 aa15.78■□□□□ 0.12
PCDHB11-202ENST00000624887 A6NNC1 897 aa15.77■□□□□ 0.12
PCDHB11-202ENST00000624887 ODF3BA8MYP8 253 aa15.77■□□□□ 0.12
PCDHB11-202ENST00000624887 MFAP2P55001 183 aa15.77■□□□□ 0.12
PCDHB11-202ENST00000624887 SELENOTP62341 195 aa15.77■□□□□ 0.12
PCDHB11-202ENST00000624887 OR1P1Q8NH06 330 aa15.77■□□□□ 0.12
PCDHB11-202ENST00000624887 OR5B12Q96R08 314 aa15.77■□□□□ 0.12
PCDHB11-202ENST00000624887 PYGO2Q9BRQ0 406 aa15.77■□□□□ 0.12
PCDHB11-202ENST00000624887 MRPL36Q9P0J6 103 aaKnown RBP15.77■□□□□ 0.12
PCDHB11-202ENST00000624887 TRBV20OR9-2A0A075B6H5 130 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 TEX22C9J3V5 150 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 IGHV3-48P01763 117 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 C8orf88P0DMB2 117 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 CD99P14209 185 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 CEACAM3P40198 252 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 GALR1P47211 349 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 UHRF2Q96PU4 802 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 UBTD1Q9HAC8 227 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 OR7C2O60412 319 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 C1orf122Q6ZSJ8 110 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 MISP3Q96FF7 219 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 PFDN5Q99471 154 aa15.76■□□□□ 0.11
PCDHB11-202ENST00000624887 TACC2O95359 2948 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 TRGC2P03986 189 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 PAX2Q02962 417 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 ZNF90Q03938 601 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 KLRD1Q13241 179 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 KIR3DL3Q8N743 410 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 NECAP1Q8NC96 275 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 OR5T1Q8NG75 326 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 CFHR4Q92496 578 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 C19orf84I3L1E1 186 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 CORTO00230 105 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 NDUFS7O75251 213 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 OR1L4Q8NGR5 311 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 SRSF12Q8WXF0 261 aaKnown RBP15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 FAM167A-AS1Q96KT0 104 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 HILPDAQ9Y5L2 63 aa15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 F11RQ9Y624 299 aaKnown RBP15.75■□□□□ 0.11
PCDHB11-202ENST00000624887 IFITM10A6NMD0 228 aa15.74■□□□□ 0.11
PCDHB11-202ENST00000624887 FCN1O00602 326 aa15.74■□□□□ 0.11
PCDHB11-202ENST00000624887 COX7A2P2O60397 106 aa15.74■□□□□ 0.11
PCDHB11-202ENST00000624887 TMEM116Q8NCL8 245 aa15.74■□□□□ 0.11
PCDHB11-202ENST00000624887 BBC3Q96PG8 261 aaPredicted RBP15.74■□□□□ 0.11
PCDHB11-202ENST00000624887 PGPEP1LA6NFU8 196 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 APELAP0DMC3 54 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 SRP14P37108 136 aaKnown RBP15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 EFNA4P52798 201 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 PLGLAQ15195 96 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 PYY3Q5JQD4 70 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 MORN5Q5VZ52 161 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 LHFPL4Q7Z7J7 247 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 SRSF8Q9BRL6 282 aaKnown RBP15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 ELOVL1Q9BW60 279 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 SLC25A2Q9BXI2 301 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 AURKAIP1Q9NWT8 199 aaPredicted RBP15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 CACNA1BQ00975 2339 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 USP24Q9UPU5 2620 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 ELOA3CA0A087WX78 387 aaPredicted RBP15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 PPP1R2P9O14990 202 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 S100A2P29034 98 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 BPIFB3P59826 476 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 MMDQ15546 238 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 C10orf113Q5VZT2 155 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 RUSC1-AS1Q66K80 236 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 PATE2Q6UY27 113 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 C19orf35Q6ZS72 473 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 OR4X1Q8NH49 305 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 C22orf15Q8WYQ4 148 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 TRGV9Q99603 122 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 SRD5A3Q9H8P0 318 aa15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 GAR1Q9NY12 217 aaKnown RBP15.73■□□□□ 0.11
PCDHB11-202ENST00000624887 A0A1W2PRE2 83 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 C9JCJ5 164 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST1H2BKO60814 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST1H2BJP06899 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 OR10J4P0C629 311 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST1H2BOP23527 126 aa15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 ZFP36P26651 326 aaKnown RBP15.72■□□□□ 0.11
PCDHB11-202ENST00000624887 HIST1H2BBP33778 126 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms