RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PLAURQ03405 335 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 BMPERQ8N8U9 685 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 LRTM2Q8N967 370 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 CD5P06127 495 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 SRSF6Q13247 344 aaKnown RBP7.36□□□□□ -1.23
CSMD1-216ENST00000602557 A0A1B0GTI1 187 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 A0A1B0GUT8 65 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 F8VVB4 439 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 F8VWA3 439 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 WNT9BO14905 357 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 DPM2O94777 84 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 SAA1P0DJI8 122 aaPredicted RBP7.36□□□□□ -1.23
CSMD1-216ENST00000602557 HIST1H4AP62805 103 aaKnown RBP7.36□□□□□ -1.23
CSMD1-216ENST00000602557 ZP4Q12836 540 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 FAM214BQ7L5A3 538 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 C1orf174Q8IYL3 243 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 KCNK17Q96T54 332 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 SRXN1Q9BYN0 137 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 SEPSECSQ9HD40 501 aaKnown RBP7.36□□□□□ -1.23
CSMD1-216ENST00000602557 UCP1P25874 307 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 NPC2P61916 151 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 DLX4Q92988 240 aaPredicted RBP7.36□□□□□ -1.23
CSMD1-216ENST00000602557 ZNF501Q96CX3 271 aaPredicted RBP7.36□□□□□ -1.23
CSMD1-216ENST00000602557 C2orf16Q68DN1 1984 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 H0YIZ8 118 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 DDB2Q92466 427 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 PSG9Q00887 426 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 GUSBP1Q15486 140 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 ABHD12Q8N2K0 398 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 Q96M66 194 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 A0A1W2PS18 150 aa7.36□□□□□ -1.23
CSMD1-216ENST00000602557 C4orf51C9J302 202 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 ADCYAP1P18509 176 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 KIF26AQ9ULI4 1882 aaPredicted RBP7.35□□□□□ -1.23
CSMD1-216ENST00000602557 BCL6BQ8N143 479 aaPredicted RBP7.35□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV3OR16-13A0A075B7E8 117 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV3-74A0A0B4J1X5 117 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 ZFHX2Q9C0A1 2572 aaPredicted RBP7.35□□□□□ -1.23
CSMD1-216ENST00000602557 IGLV1-36A0A0B4J1U3 117 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 A0A1W2PQM1 296 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 PRR33A8MZF0 331 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 GTSCR1Q86UQ5 136 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV3-35A0A0C4DH35 117 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 LY6EQ16553 131 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 C1orf100Q5SVJ3 147 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 TRAV9-1A0A075B6T8 112 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 C17orf51A8MQB3 221 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 TMEM101Q96IK0 257 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 A0A087WV48 116 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 FXYD7P58549 80 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 ATP5G2Q06055 141 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 UNQ9370/PRO34162Q6UXP9 181 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 ANKHD1Q8IWZ3 2542 aaKnown RBP7.35□□□□□ -1.23
CSMD1-216ENST00000602557 TRBV7-9A0A0J9YWB2 115 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 TMEM131Q92545 1883 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 C2CD3Q4AC94 2353 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 A0A1W2PRE2 83 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 RPL39P5Q59GN2 51 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 MIR17HGQ75NE6 70 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 DLL3Q9NYJ7 618 aa7.35□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 ZNF815PA8K554 130 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 C1orf53Q5VUE5 145 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 THSD7AQ9UPZ6 1657 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 SLC25A47Q6Q0C1 308 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 RFNGQ9Y644 331 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 IGKV3-20P01619 116 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 PEAR1Q5VY43 1037 aaPredicted RBP7.34□□□□□ -1.23
CSMD1-216ENST00000602557 ASPHD2Q6ICH7 369 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 KIR3DL3Q8N743 410 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV3-49A0A0A0MS15 119 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 CDPF1Q6NVV7 123 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 LINC00305Q7Z4B0 112 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 KLF14Q8TD94 323 aaPredicted RBP7.34□□□□□ -1.23
CSMD1-216ENST00000602557 KIR2DL4Q99706 377 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 PILRAQ9UKJ1 303 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 TCF19Q9Y242 345 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 M0R381 172 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 CDCP2Q5VXM1 449 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 WDR82Q6UXN9 313 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 IDI2-AS1Q9NZ38 188 aa7.34□□□□□ -1.23
CSMD1-216ENST00000602557 IGHV3OR16-10A0A075B7F0 116 aa7.34□□□□□ -1.24
CSMD1-216ENST00000602557 OR10J3Q5JRS4 329 aa7.34□□□□□ -1.24
CSMD1-216ENST00000602557 PRSS57Q6UWY2 283 aa7.34□□□□□ -1.24
CSMD1-216ENST00000602557 COQ2Q96H96 371 aa7.34□□□□□ -1.24
CSMD1-216ENST00000602557 RAX2Q96IS3 184 aa7.34□□□□□ -1.24
CSMD1-216ENST00000602557 VSIRQ9H7M9 311 aa7.34□□□□□ -1.24
CSMD1-216ENST00000602557 KLF12Q9Y4X4 402 aa7.34□□□□□ -1.24
CSMD1-216ENST00000602557 CTSBP07858 339 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 MFAP4P55083 255 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 ERVK11-1P61568 191 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 SHISA5Q8N114 240 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 DUX5Q96PT3 197 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 CLEC7AQ9BXN2 247 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 ARHGAP32A7KAX9 2087 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 FAM90A26D6RGX4 464 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 THY1P04216 161 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 NKX2-8O15522 239 aa7.33□□□□□ -1.24
CSMD1-216ENST00000602557 ORMDL3Q8N138 153 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 271.4 ms