RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CD3EP07766 207 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 OR9G9P0C7N8 305 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 PPIAL4FP0DN26 164 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 AMTP48728 403 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 LGALS4P56470 323 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 S1PR3Q99500 378 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 QTRT1Q9BXR0 403 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 CST9LQ9H4G1 147 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 GNB4Q9HAV0 340 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 DSCAML1Q8TD84 2053 aa13.94□□□□□ -0.18
SHKBP1-205ENST00000594973 F2Z2F3 143 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 MT-ND6P03923 174 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 ST6GALNAC3Q8NDV1 305 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 IDI2-AS1Q9NZ38 188 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 ZNRD1Q9P1U0 126 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 DCHS2Q6V1P9 2916 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 C17orf112F2Z3M2 114 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 CDC34P49427 236 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 CDSNQ15517 529 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 COX19Q49B96 90 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 RAB1CQ92928 201 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 PIEZO1Q92508 2521 aa13.93□□□□□ -0.18
SHKBP1-205ENST00000594973 hADV38S2A0JD32 116 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 M0QZ24 198 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 RPL31P62899 125 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 Q6ZVH6 145 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 UHRF2Q96PU4 802 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 ABCA4P78363 2273 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 TMEM238C9JI98 176 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 FCN3O75636 299 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 C3orf79P0CE67 100 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 ATP5G3P48201 142 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 VAMP3Q15836 100 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 LRRC10Q5BKY1 277 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 LYPD2Q6UXB3 125 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 MUC15Q8N387 334 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 H1FXQ92522 213 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 DERL1Q9BUN8 251 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 TANC2Q9HCD6 1990 aa13.92□□□□□ -0.18
SHKBP1-205ENST00000594973 TRAV34A0A0B4J273 112 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 A0A1W2PS18 150 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 SNURFLB1AK76 121 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 APOBEC3AP31941 199 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 WDR73Q6P4I2 378 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 FAM216AQ8WUB2 273 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 SMIM12Q96EX1 92 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 NPCDR1Q9BY65 106 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 MS4A5Q9H3V2 200 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 TACC2O95359 2948 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 ZNF324O75467 553 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 CCL3L1P16619 93 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 ERVK-16P61578 105 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 VWC2Q2TAL6 325 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 LDLRAD2Q5SZI1 272 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 OR4A16Q8NH70 328 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 LINC00312Q9Y6C7 94 aa13.91□□□□□ -0.18
SHKBP1-205ENST00000594973 TRBV20OR9-2A0A075B6H5 130 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 TRAV3A0A0B4J244 114 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 IER3P46695 156 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 RHOBP62745 196 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 LY6DQ14210 128 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 ZNF439Q8NDP4 499 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 NUDT11Q96G61 164 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 RPUSD1Q9UJJ7 312 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 LY96Q9Y6Y9 160 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 ARFGEF3Q5TH69 2177 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 PGPEP1LA6NFU8 196 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 ADORA2A-AS1P86434 159 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 CLEC2AQ6UVW9 174 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 OR4F17Q8NGA8 305 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 OR4P4Q8NGL7 312 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 OCC1Q8TAD7 63 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 DDB2Q92466 427 aa13.9□□□□□ -0.18
SHKBP1-205ENST00000594973 K7ERU9 68 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 PLA2G5P39877 138 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 RPEL1Q2QD12 228 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 NIT1Q86X76 327 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 OR10P1Q8NGE3 313 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 OR4S2Q8NH73 311 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 TMEM140Q9NV12 185 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 HCFC1P51610 2035 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 PMS2P5A8MQ11 134 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 TMEM200BQ69YZ2 307 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 BORCS7Q96B45 105 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 LINC00574Q9H8X3 128 aa13.89□□□□□ -0.19
SHKBP1-205ENST00000594973 TRAV9-2A0A087WT02 112 aa13.88□□□□□ -0.19
SHKBP1-205ENST00000594973 B9A039 149 aa13.88□□□□□ -0.19
SHKBP1-205ENST00000594973 LYNX1G3V0Z9 82 aa13.88□□□□□ -0.19
SHKBP1-205ENST00000594973 NDUFB3O43676 98 aa13.88□□□□□ -0.19
SHKBP1-205ENST00000594973 LYNX1P0DP58 116 aa13.88□□□□□ -0.19
SHKBP1-205ENST00000594973 ZNF714Q96N38 554 aa13.88□□□□□ -0.19
SHKBP1-205ENST00000594973 CTSZQ9UBR2 303 aa13.88□□□□□ -0.19
SHKBP1-205ENST00000594973 TOX4O94842 621 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 PMCHP20382 165 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 KIR2DS2P43631 304 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 TFF3Q07654 80 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 SLC25A48Q6ZT89 311 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 WNT10AQ9GZT5 417 aa13.87□□□□□ -0.19
SHKBP1-205ENST00000594973 CA2P00918 260 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms