RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 DMRT1Q9Y5R6 373 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 IGHV3-43A0A0B4J1X8 118 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 LINC01549A6NIU2 74 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 H0YL77 283 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 TRGV3P03979 118 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 IGHV3-43DP0DP04 118 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 B4GALT1P15291 398 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 GZMHP20718 246 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 MDKP21741 143 aaPredicted RBP3.62□□□□□ -1.83
RTTN-206ENST00000581161 C1QL2Q7Z5L3 287 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 DUSP15Q9H1R2 295 aaPredicted RBP3.62□□□□□ -1.83
RTTN-206ENST00000581161 TMEM160Q9NX00 188 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 SPCS1Q9Y6A9 102 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 DMXL1Q9Y485 3027 aa3.62□□□□□ -1.83
RTTN-206ENST00000581161 DSPP15924 2871 aaKnown RBP3.61□□□□□ -1.83
RTTN-206ENST00000581161 IGKV1D-8A0A087WSZ0 117 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 IGKV3D-20A0A0C4DH25 116 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 RS1O15537 224 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 TSPAN2O60636 221 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 CD28P10747 220 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 RIPPLY3P57055 190 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 QRFPP83859 136 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 ANKRD37Q7Z713 158 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 OR5P3Q8WZ94 311 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 NPIPB3Q92617 1050 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 GTF3AQ92664 365 aaKnown RBP3.61□□□□□ -1.83
RTTN-206ENST00000581161 WDR54Q9H977 334 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 OTORQ9NRC9 128 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.61□□□□□ -1.83
RTTN-206ENST00000581161 A0A1W2PQD3 144 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 RAMP1O60894 148 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 NPIPB7O75200 414 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 DANCRP0C864 163 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 MYF5P13349 255 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 IER3P46695 156 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 HLA-DRB3P79483 266 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 IL13RA2Q14627 380 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 SURF2Q15527 256 aaPredicted RBP3.61□□□□□ -1.83
RTTN-206ENST00000581161 SPATA45Q537H7 98 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 DCAF10Q5QP82 559 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 ST20Q9HBF5 79 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 DHHO43323 396 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 CST7O76096 145 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 SOX8P57073 446 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 EWSR1Q01844 656 aaKnown RBP eCLIP3.61□□□□□ -1.83
RTTN-206ENST00000581161 C3orf36Q3SXR2 165 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 PHF7Q9BWX1 381 aaPredicted RBP3.61□□□□□ -1.83
RTTN-206ENST00000581161 C1QTNF4Q9BXJ3 329 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 FOXD3Q9UJU5 478 aaPredicted RBP3.61□□□□□ -1.83
RTTN-206ENST00000581161 HILPDAQ9Y5L2 63 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 MPC1Q9Y5U8 109 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 RFNGQ9Y644 331 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 LHFPL6Q9Y693 200 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 WSB1Q9Y6I7 421 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 TRAV25A0A0B4J276 109 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 EPOPA6NHQ4 379 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 LIPT2A6NK58 231 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 PROB1E7EW31 1015 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 SOCS3O14543 225 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 P2RY1P47900 373 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 KRTCAP3Q53RY4 240 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 C15orf53Q8NAA6 179 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 C21orf62Q9NYP8 219 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 LOC105371242A0A075B767 164 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 SAP30O75446 220 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 LEPROTL1O95214 131 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 RUNX1Q01196 453 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 SPINK9Q5DT21 86 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 PRO3102Q9H379 93 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 PLA2G2EQ9NZK7 142 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 CRIM1Q9NZV1 1036 aa3.61□□□□□ -1.83
RTTN-206ENST00000581161 A0A087X0M5 115 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 IGHV3-15A0A0B4J1V0 119 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 A0A1B0GX30 115 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 NPIPB11E5RHQ5 1161 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 NCR2O95944 276 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 CYB5R3P00387 301 aaPredicted RBP3.6□□□□□ -1.83
RTTN-206ENST00000581161 IGHMP01871 453 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 PSG1P11464 419 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 NBL1P41271 181 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 CCL20P78556 96 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 ZNF146Q15072 292 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 ZFAND6Q6FIF0 208 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 FAM214BQ7L5A3 538 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
RTTN-206ENST00000581161 LINC00596Q86U02 117 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 MMD2Q8IY49 270 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 RNASE4P34096 147 aaKnown RBP3.6□□□□□ -1.83
RTTN-206ENST00000581161 OR5C1Q8NGR4 320 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 TMEM54Q969K7 222 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 TXNDC17Q9BRA2 123 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 UBL5Q9BZL1 73 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 ZNF319Q9P2F9 582 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 SMG1Q96Q15 3661 aaKnown RBP3.6□□□□□ -1.83
RTTN-206ENST00000581161 NKX2-6A6NCS4 301 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 H3BP45 60 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 SRIP30626 198 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 PAX8Q06710 450 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 CEACAM16Q2WEN9 425 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 C6orf226Q5I0X4 101 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms