RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 C9JCJ5 164 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 YPEL1O60688 119 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 SFTPCP11686 197 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 NPPCP23582 126 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 CX3CL1P78423 397 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 TMEM105Q8N8V8 129 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 YPEL2Q96QA6 119 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 AP5S1Q9NUS5 200 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 HIGD1AQ9Y241 93 aa8.71□□□□□ -1.02
USB1-212ENST00000566082 ASPHD1Q5U4P2 390 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 ZNF841Q6ZN19 808 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 ZNF714Q96N38 554 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 A0A1W2PRE2 83 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 LIPFP07098 398 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 WDR86Q86TI4 376 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 NIT1Q86X76 327 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 C11orf1Q9H5F2 150 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 CACNA1BQ00975 2339 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 MUC21A0A0G2JKD1 596 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 MUC21A0A140T8X8 626 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 KBTBD11-OT1A0A1B0GTJ5 212 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 A0A1W2PS18 150 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 M0QZ24 198 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 LMO1P25800 156 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 MUC21Q5SSG8 566 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 ODF3L1Q8IXM7 274 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 YPEL4Q96NS1 127 aa8.7□□□□□ -1.02
USB1-212ENST00000566082 YLPM1P49750 1951 aaKnown RBP8.7□□□□□ -1.02
USB1-212ENST00000566082 NCBP2LA6PVI3 153 aaKnown RBP8.69□□□□□ -1.02
USB1-212ENST00000566082 PRR33A8MZF0 331 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 SAA1P0DJI8 122 aaPredicted RBP8.69□□□□□ -1.02
USB1-212ENST00000566082 AREGP15514 252 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 YPEL3P61236 119 aaPredicted RBP8.69□□□□□ -1.02
USB1-212ENST00000566082 ARF6P62330 175 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 F11RQ9Y624 299 aaKnown RBP8.69□□□□□ -1.02
USB1-212ENST00000566082 ABCA4P78363 2273 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 IGHV2OR16-5A0A0B4J2B6 119 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 MLNRO43193 412 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 GNG7O60262 68 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 ORM1P02763 201 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 TSPOP30536 169 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 CD177Q8N6Q3 437 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 MCRIP2Q9BUT9 160 aaKnown RBP8.69□□□□□ -1.02
USB1-212ENST00000566082 CLEC7AQ9BXN2 247 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 C10orf55Q5SWW7 151 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 Q8NFD4 153 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 OR4C13Q8NGP0 309 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 TSKUQ8WUA8 353 aa8.69□□□□□ -1.02
USB1-212ENST00000566082 ADAMTS9Q9P2N4 1935 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 PLCE1Q9P212 2302 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 ZNF785A8K8V0 405 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 PPIAL4DF5H284 164 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 RPL15P61313 204 aaKnown RBP8.68□□□□□ -1.02
USB1-212ENST00000566082 MPV17L2Q567V2 206 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 Q6ZSR3 168 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 NUDT10Q8NFP7 164 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 OR52E5Q8NH55 327 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 RNF138Q8WVD3 245 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 NUDT11Q96G61 164 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 ONECUT1Q9UBC0 465 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 C9orf172C9J069 976 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 UPK2O00526 184 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 CD69Q07108 199 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 Q6ZVH6 145 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 OR10AG1Q8NH19 301 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 SNRNP40Q96DI7 357 aaKnown RBP8.68□□□□□ -1.02
USB1-212ENST00000566082 GPR82Q96P67 336 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 MRPL20Q9BYC9 149 aaKnown RBP8.68□□□□□ -1.02
USB1-212ENST00000566082 RPP21Q9H633 154 aaKnown RBP8.68□□□□□ -1.02
USB1-212ENST00000566082 SPRR3Q9UBC9 169 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 GTF3C1Q12789 2109 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 PPIAL4EA0A075B759 164 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 hDV102S1A0JD36 115 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 FAM181BA6NEQ2 426 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 M0R296 226 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 NTN3O00634 580 aaPredicted RBP8.68□□□□□ -1.02
USB1-212ENST00000566082 APOHP02749 345 aaPredicted RBP8.68□□□□□ -1.02
USB1-212ENST00000566082 CLEC3BP05452 202 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 PPIAL4FP0DN26 164 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 GCSHP23434 173 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 RPL11P62913 178 aaKnown RBP8.68□□□□□ -1.02
USB1-212ENST00000566082 Q0VG73 95 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 TM4SF20Q53R12 229 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 CHODLQ9H9P2 273 aa8.68□□□□□ -1.02
USB1-212ENST00000566082 KIR2DL5BA0A0G2JN68 375 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 KIR2DL5BA0A0G2JPC4 375 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 IGLC2P0DOY2 106 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 CCL3L1P16619 93 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 KIR2DL5AQ8N109 375 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 STPG4Q8N801 248 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 PPP1R14DQ9NXH3 145 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 PEF1Q9UBV8 284 aaKnown RBP8.67□□□□□ -1.02
USB1-212ENST00000566082 TNCP24821 2201 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 CKS2P33552 79 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 PLP1P60201 277 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 PRCDQ00LT1 54 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 TMEM97Q5BJF2 176 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 WFDC3Q8IUB2 231 aa8.67□□□□□ -1.02
USB1-212ENST00000566082 C9orf106Q8NAJ2 232 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms