RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SLC25A33Q9BSK2 321 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 SIRPDQ9H106 197 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 FLNCQ14315 2725 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 CACNA1BQ00975 2339 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 SCO2A0A1W2PP80 73 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 CXorf65A6NEN9 183 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 C1orf196B1AJZ1 125 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 CRYGCP07315 174 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 CTRB1P17538 263 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 CTRB2Q6GPI1 263 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 DOK5Q9P104 306 aa15.24■□□□□ 0.03
SMPD3-203ENST00000563226 IGHV4-39P01824 125 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 RAB5BP61020 215 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 LMO4P61968 165 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 MRPL41Q8IXM3 137 aaKnown RBP15.23■□□□□ 0.03
SMPD3-203ENST00000563226 MALSU1Q96EH3 234 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 EAF1Q96JC9 268 aaPredicted RBP15.23■□□□□ 0.03
SMPD3-203ENST00000563226 IGHV2-70DA0A0C4DH43 119 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 TCRBV4S1A1TA0A5B7 111 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 F6UZH7 168 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 NBR2O15453 112 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 MOSP00540 346 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 C16orf82Q7Z2V1 217 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 OR1P1Q8NH06 330 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 TMEM242Q9NWH2 141 aa15.23■□□□□ 0.03
SMPD3-203ENST00000563226 F11RQ9Y624 299 aaKnown RBP15.23■□□□□ 0.03
SMPD3-203ENST00000563226 CLDN34H7C241 214 aa15.22■□□□□ 0.03
SMPD3-203ENST00000563226 CLN5O75503 358 aa15.22■□□□□ 0.03
SMPD3-203ENST00000563226 MT-CO2P00403 227 aa15.22■□□□□ 0.03
SMPD3-203ENST00000563226 AURKAIP1Q9NWT8 199 aaPredicted RBP15.22■□□□□ 0.03
SMPD3-203ENST00000563226 TECRQ9NZ01 308 aaKnown RBP15.22■□□□□ 0.03
SMPD3-203ENST00000563226 TRAV5A0A0B4J249 113 aa15.21■□□□□ 0.03
SMPD3-203ENST00000563226 HES1Q14469 280 aa15.21■□□□□ 0.03
SMPD3-203ENST00000563226 PATE2Q6UY27 113 aa15.21■□□□□ 0.03
SMPD3-203ENST00000563226 OR5T1Q8NG75 326 aa15.21■□□□□ 0.03
SMPD3-203ENST00000563226 PGPEP1LA6NFU8 196 aa15.21■□□□□ 0.03
SMPD3-203ENST00000563226 OR7C2O60412 319 aa15.21■□□□□ 0.03
SMPD3-203ENST00000563226 NDUFA3O95167 84 aa15.21■□□□□ 0.03
SMPD3-203ENST00000563226 PRB1P04280 392 aa15.21■□□□□ 0.03
SMPD3-203ENST00000563226 RPS10P46783 165 aaKnown RBP15.21■□□□□ 0.03
SMPD3-203ENST00000563226 USP9XQ93008 2570 aaPredicted RBP15.21■□□□□ 0.02
SMPD3-203ENST00000563226 TRBV20OR9-2A0A075B6H5 130 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 OR10J4P0C629 311 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 NPBQ8NG41 125 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 FAM167A-AS1Q96KT0 104 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 UHRF2Q96PU4 802 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 TBX15Q96SF7 602 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 TXNDC17Q9BRA2 123 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 FAM103A1Q9BTL3 118 aaKnown RBP15.2■□□□□ 0.02
SMPD3-203ENST00000563226 C19orf24Q9BVV8 132 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 SLC25A2Q9BXI2 301 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 DNAJC4Q9NNZ3 241 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 CNIH1O95406 144 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 C8orf88P0DMB2 117 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 ETFRF1Q6IPR1 90 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 LINC01551Q86U37 167 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 OR4X1Q8NH49 305 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 CTDSP1Q9GZU7 261 aa15.2■□□□□ 0.02
SMPD3-203ENST00000563226 GSX1Q9H4S2 264 aaPredicted RBP15.2■□□□□ 0.02
SMPD3-203ENST00000563226 DOPEY1Q5JWR5 2465 aa15.19■□□□□ 0.02
SMPD3-203ENST00000563226 ABCA1O95477 2261 aa15.19■□□□□ 0.02
SMPD3-203ENST00000563226 BIN3Q9NQY0 253 aa15.19■□□□□ 0.02
SMPD3-203ENST00000563226 TNFRSF19Q9NS68 423 aa15.19■□□□□ 0.02
SMPD3-203ENST00000563226 ABCA2Q9BZC7 2435 aa15.19■□□□□ 0.02
SMPD3-203ENST00000563226 COX7A2P2O60397 106 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 TOX4O94842 621 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 PQLC2Q6ZP29 291 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 NECAP1Q8NC96 275 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 MRPL32Q9BYC8 188 aaKnown RBP15.18■□□□□ 0.02
SMPD3-203ENST00000563226 LPAR2Q9HBW0 351 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 TMEM167BQ9NRX6 74 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 TAS2R45P59539 299 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 C5orf64Q2M2E5 130 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 C10orf113Q5VZT2 155 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 TMEM116Q8NCL8 245 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 OR2T10Q8NGZ9 312 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 ELOVL1Q9BW60 279 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 WNT10AQ9GZT5 417 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 ZNF355PQ9NSJ1 428 aa15.18■□□□□ 0.02
SMPD3-203ENST00000563226 SNRPEP62304 92 aaKnown RBP15.17■□□□□ 0.02
SMPD3-203ENST00000563226 MINOS1Q5TGZ0 78 aa15.17■□□□□ 0.02
SMPD3-203ENST00000563226 CCDC144NLQ6NUI1 221 aa15.17■□□□□ 0.02
SMPD3-203ENST00000563226 OR5AU1Q8NGC0 362 aa15.17■□□□□ 0.02
SMPD3-203ENST00000563226 AJUBAQ96IF1 538 aa15.17■□□□□ 0.02
SMPD3-203ENST00000563226 BBC3Q96PG8 261 aaPredicted RBP15.17■□□□□ 0.02
SMPD3-203ENST00000563226 MINOS1-NBL1R4GNA1 71 aa15.17■□□□□ 0.02
SMPD3-203ENST00000563226 ZFYVE26Q68DK2 2539 aa15.17■□□□□ 0.02
SMPD3-203ENST00000563226 CORTO00230 105 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 SELENOTP62341 195 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 FXYD3Q14802 87 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 C1QL4Q86Z23 238 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 C11orf52Q96A22 123 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 KLF2Q9Y5W3 355 aaPredicted RBP15.16■□□□□ 0.02
SMPD3-203ENST00000563226 GGTLC3B5MD39 225 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 H7BYZ3 331 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 I3L2K1 104 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 PYYP10082 97 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 PDLIM4P50479 330 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 Q8N6K4 173 aa15.16■□□□□ 0.02
SMPD3-203ENST00000563226 OR1L4Q8NGR5 311 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms