RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 MRPL41Q8IXM3 137 aaKnown RBP18.23■□□□□ 0.51
RCCD1-208ENST00000557266 MMD2Q8IY49 270 aa18.23■□□□□ 0.51
RCCD1-208ENST00000557266 SLC25A17O43808 307 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 IGHV1-8P0DP01 117 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 MRGPRG-AS1Q2M3A8 158 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 RPEL1Q2QD12 228 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 C11orf42Q8N5U0 333 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 DNAJC4Q9NNZ3 241 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 IGHV3-48P01763 117 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 NPIPB3Q92617 1050 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 ARFGEF3Q5TH69 2177 aa18.22■□□□□ 0.51
RCCD1-208ENST00000557266 NAV3Q8IVL0 2385 aa18.21■□□□□ 0.51
RCCD1-208ENST00000557266 CACNA1AO00555 2505 aa18.21■□□□□ 0.51
RCCD1-208ENST00000557266 IGKV1D-37A0A075B6S9 117 aa18.21■□□□□ 0.51
RCCD1-208ENST00000557266 FRMD6-AS1P0C7T7 363 aa18.21■□□□□ 0.51
RCCD1-208ENST00000557266 SELENOTP62341 195 aa18.21■□□□□ 0.51
RCCD1-208ENST00000557266 MRPL36Q9P0J6 103 aaKnown RBP18.21■□□□□ 0.51
RCCD1-208ENST00000557266 NCOR2Q9Y618 2525 aa18.21■□□□□ 0.51
RCCD1-208ENST00000557266 GRIFINA4D1Z8 144 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 ZNF705GA8MUZ8 300 aaPredicted RBP18.2■□□□□ 0.5
RCCD1-208ENST00000557266 IGLV2-8P01709 118 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 UBE2L3P68036 154 aaKnown RBP18.2■□□□□ 0.5
RCCD1-208ENST00000557266 ZNF664Q8N3J9 261 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 RNF2Q99496 336 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 MRPL18Q9H0U6 180 aaKnown RBP18.2■□□□□ 0.5
RCCD1-208ENST00000557266 RNASE7Q9H1E1 156 aaKnown RBP18.2■□□□□ 0.5
RCCD1-208ENST00000557266 NGBQ9NPG2 151 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 IGHV1-69-2A0A0G2JMI3 117 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 A0A1W2PPI3 338 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 VMA21Q3ZAQ7 101 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 OR5AU1Q8NGC0 362 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 OR1L6Q8NGR2 347 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 IGF2BP2-AS1Q96M15 143 aa18.2■□□□□ 0.5
RCCD1-208ENST00000557266 REG1AP05451 166 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 SUB1P53999 127 aaKnown RBP eCLIP18.19■□□□□ 0.53e-7■■■□□ 19
RCCD1-208ENST00000557266 TIGITQ495A1 244 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 PATE2Q6UY27 113 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 OR8I2Q8N0Y5 310 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 TP53TG3Q9ULZ0 132 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 IGHV3-72A0A0B4J1Y9 119 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 TCRBV4S1A1TA0A5B7 111 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 COX7A2P2O60397 106 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 MC5RP33032 325 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 THAP8Q8NA92 274 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 TMEM133Q9H2Q1 129 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 ZNF355PQ9NSJ1 428 aa18.19■□□□□ 0.5
RCCD1-208ENST00000557266 PYYP10082 97 aa18.18■□□□□ 0.5
RCCD1-208ENST00000557266 IER3P46695 156 aa18.18■□□□□ 0.5
RCCD1-208ENST00000557266 PPOXP50336 477 aa18.18■□□□□ 0.5
RCCD1-208ENST00000557266 REC114Q7Z4M0 266 aa18.18■□□□□ 0.5
RCCD1-208ENST00000557266 OSTCQ9NRP0 149 aa18.18■□□□□ 0.5
RCCD1-208ENST00000557266 ZZEF1O43149 2961 aa18.17■□□□□ 0.5
RCCD1-208ENST00000557266 FXYD3Q14802 87 aa18.17■□□□□ 0.5
RCCD1-208ENST00000557266 C10orf113Q5VZT2 155 aa18.17■□□□□ 0.5
RCCD1-208ENST00000557266 FSTL3O95633 263 aa18.17■□□□□ 0.5
RCCD1-208ENST00000557266 FAM87AP0C7U9 286 aa18.17■□□□□ 0.5
RCCD1-208ENST00000557266 DLX1P56177 255 aa18.17■□□□□ 0.5
RCCD1-208ENST00000557266 LINC00310P59036 64 aa18.17■□□□□ 0.5
RCCD1-208ENST00000557266 FCN1O00602 326 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 ISLRO14498 428 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 ENSAO43768 121 aaKnown RBP18.16■□□□□ 0.5
RCCD1-208ENST00000557266 LGALS7P47929 136 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 RUSC1-AS1Q66K80 236 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 ST6GALNAC3Q8NDV1 305 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 OR1L4Q8NGR5 311 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 ZMAT5Q9UDW3 170 aaKnown RBP18.16■□□□□ 0.5
RCCD1-208ENST00000557266 IGLC7A0M8Q6 106 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 A8MWP6 167 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 APOBEC3AP31941 199 aaPredicted RBP18.16■□□□□ 0.5
RCCD1-208ENST00000557266 PAXXQ9BUH6 204 aa18.16■□□□□ 0.5
RCCD1-208ENST00000557266 CHD8Q9HCK8 2581 aa18.15■□□□□ 0.5
RCCD1-208ENST00000557266 SNURFLB1AK76 121 aa18.15■□□□□ 0.5
RCCD1-208ENST00000557266 IQCJQ1A5X6 159 aa18.15■□□□□ 0.5
RCCD1-208ENST00000557266 CMTM2Q8TAZ6 248 aa18.15■□□□□ 0.5
RCCD1-208ENST00000557266 LINC00479Q96M42 142 aa18.15■□□□□ 0.5
RCCD1-208ENST00000557266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.14■□□□□ 0.5
RCCD1-208ENST00000557266 PLAUP00749 431 aa18.14■□□□□ 0.5
RCCD1-208ENST00000557266 CRISP2P16562 243 aa18.14■□□□□ 0.5
RCCD1-208ENST00000557266 BPIFB3P59826 476 aa18.14■□□□□ 0.5
RCCD1-208ENST00000557266 RAB4BP61018 213 aa18.14■□□□□ 0.5
RCCD1-208ENST00000557266 CX3CL1P78423 397 aa18.14■□□□□ 0.5
RCCD1-208ENST00000557266 PRB3Q04118 309 aaPredicted RBP18.14■□□□□ 0.5
RCCD1-208ENST00000557266 SSX2Q16385 188 aa18.14■□□□□ 0.5
RCCD1-208ENST00000557266 B9A039 149 aa18.14■□□□□ 0.49
RCCD1-208ENST00000557266 MGST1P10620 155 aaKnown RBP18.14■□□□□ 0.49
RCCD1-208ENST00000557266 MFAP2P55001 183 aa18.14■□□□□ 0.49
RCCD1-208ENST00000557266 HCP5Q6MZN7 132 aa18.14■□□□□ 0.49
RCCD1-208ENST00000557266 NOL4LQ96MY1 436 aaPredicted RBP18.14■□□□□ 0.49
RCCD1-208ENST00000557266 GNB1LQ9BYB4 327 aa18.14■□□□□ 0.49
RCCD1-208ENST00000557266 CDC42EP3Q9UKI2 254 aa18.14■□□□□ 0.49
RCCD1-208ENST00000557266 TLN1Q9Y490 2541 aaKnown RBP18.14■□□□□ 0.49
RCCD1-208ENST00000557266 TRBV9A0A0B4J1U6 114 aa18.13■□□□□ 0.49
RCCD1-208ENST00000557266 IGHV2-26A0A0B4J1V2 119 aa18.13■□□□□ 0.49
RCCD1-208ENST00000557266 C22orf46C9J442 243 aa18.13■□□□□ 0.49
RCCD1-208ENST00000557266 LYNX1G3V0Z9 82 aa18.13■□□□□ 0.49
RCCD1-208ENST00000557266 CD3EP07766 207 aa18.13■□□□□ 0.49
RCCD1-208ENST00000557266 LYNX1P0DP58 116 aa18.13■□□□□ 0.49
RCCD1-208ENST00000557266 CNTFRP26992 372 aa18.13■□□□□ 0.49
RCCD1-208ENST00000557266 RBPJQ06330 500 aa18.13■□□□□ 0.49
RCCD1-208ENST00000557266 PVRIGQ6DKI7 326 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms