RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CLCC1Q96S66 551 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 MED28Q9H204 178 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 PLEKHA3Q9HB20 300 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 PARP11Q9NR21 331 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 KLK9Q9UKQ9 250 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 C2CD3Q4AC94 2353 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 C13orf42A0A1B0GVH6 325 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 A0A1B0GW64 132 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 IGLC7A0M8Q6 106 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 C5orf51A6NDU8 294 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 IFNA17P01571 189 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 IGHG4P01861 327 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 CRYGCP07315 174 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 HIST1H1BP16401 226 aaKnown RBP4.47□□□□□ -1.69
SCAF11-213ENST00000550629 HTR2BP41595 481 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 H2BFSP57053 126 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 TAS2R30P59541 319 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 RRAS2P62070 204 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-213ENST00000550629 WT1-ASQ06250 92 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 IL15RAQ13261 267 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 IZUMO4Q1ZYL8 232 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 BSXQ3C1V8 233 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 C10orf55Q5SWW7 151 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 NOXA1Q86UR1 476 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-213ENST00000550629 ZBTB8BQ8NAP8 495 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-213ENST00000550629 UXS1Q8NBZ7 420 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 ZNF114Q8NC26 417 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 OR4D5Q8NGN0 318 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 FAM110DQ8TAY7 271 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-213ENST00000550629 ZNF479Q96JC4 524 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 OR10C1Q96KK4 312 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 C2orf50Q96LR7 162 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 NMES1Q9C002 83 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 SLA2Q9H6Q3 261 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 ENY2Q9NPA8 101 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 NSG2Q9Y328 171 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 FBXO7Q9Y3I1 522 aa4.47□□□□□ -1.69
SCAF11-213ENST00000550629 TENM1Q9UKZ4 2725 aa4.46□□□□□ -1.69
SCAF11-213ENST00000550629 FBN1P35555 2871 aaKnown RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 RPS10-NUDT3A0A1W2PQS6 291 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 PSMB11A5LHX3 300 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 SH2D7A6NKC9 451 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 FAM223BA6NKX1 122 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 CEBPZOSA8MTT3 80 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 MPTX1A8MV57 137 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 FAM25EA8MYX2 175 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 CORTO00230 105 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 GOSR2O14653 212 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 SYNGR2O43760 224 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 GIPP09681 153 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 PET100P0DJ07 73 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 OR13C7P0DN81 318 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 AREGP15514 252 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 CTRB1P17538 263 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 PSMB6P28072 239 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 SNCAP37840 140 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 NKX2-1P43699 371 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 HOXA1P49639 335 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 SUB1P53999 127 aaKnown RBP eCLIP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 RPP30P78346 268 aaKnown RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 ERHP84090 104 aaKnown RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 KRTAP21-3Q3LHN1 58 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 KRTAP24-1Q3LI83 254 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 CXorf66Q5JRM2 361 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 PVRIGQ6DKI7 326 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 CTRB2Q6GPI1 263 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 TEX38Q6PEX7 206 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 UNQ5815/PRO19632Q6UWF5 114 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 CENPVQ7Z7K6 275 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 FAM223AQ8IWN6 122 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 NECAP1Q8NC96 275 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 LFNGQ8NES3 379 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 OR1P1Q8NH06 330 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 DTD1Q8TEA8 209 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 RAB40CQ96S21 281 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 ATP6V0BQ99437 205 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 C19orf24Q9BVV8 132 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 HINT2Q9BX68 163 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 ZNF436Q9C0F3 470 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 RBKSQ9H477 322 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 THYN1Q9P016 225 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 GSKIPQ9P0R6 139 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 F11RQ9Y624 299 aaKnown RBP4.46□□□□□ -1.7
SCAF11-213ENST00000550629 WSB1Q9Y6I7 421 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 U3KQ87 197 aa4.46□□□□□ -1.7
SCAF11-213ENST00000550629 IGLV11-55A0A075B6I3 123 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 TRBV9A0A0B4J1U6 114 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 A0A0G2JLM5 398 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 HMX3A6NHT5 357 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 E7EUB6 86 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 G3V318 75 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 WRBO00258 174 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 CCSO14618 274 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 TSC22D2O75157 780 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 OPN1MWP04001 364 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 RLN2P04090 185 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 OPN1MW2P0DN77 364 aa4.45□□□□□ -1.7
SCAF11-213ENST00000550629 OPN1MW3P0DN78 364 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms