RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 NPY1RP25929 384 aa17.24■□□□□ 0.35
SFSWAP-204ENST00000535399 DUSP18Q8NEJ0 188 aa17.24■□□□□ 0.35
SFSWAP-204ENST00000535399 MRPL36Q9P0J6 103 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-204ENST00000535399 NUPL2O15504 423 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-204ENST00000535399 OPRK1P41145 380 aa17.23■□□□□ 0.35
SFSWAP-204ENST00000535399 RNASEH2CQ8TDP1 164 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-204ENST00000535399 TMEM190Q8WZ59 177 aa17.23■□□□□ 0.35
SFSWAP-204ENST00000535399 SEC22CQ9BRL7 303 aa17.23■□□□□ 0.35
SFSWAP-204ENST00000535399 U3KQ87 197 aa17.23■□□□□ 0.35
SFSWAP-204ENST00000535399 NDUFA4O00483 81 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 LY86O95711 162 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 IFNA21P01568 189 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 NPBWR1P48145 328 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 TM4SF20Q53R12 229 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 NOXA1Q86UR1 476 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 ZNF431Q8TF32 576 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 CACNG8Q8WXS5 425 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 PALMDQ9NP74 551 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 SORL1Q92673 2214 aa17.22■□□□□ 0.35
SFSWAP-204ENST00000535399 GNG7O60262 68 aa17.21■□□□□ 0.35
SFSWAP-204ENST00000535399 IFNA10P01566 189 aa17.21■□□□□ 0.35
SFSWAP-204ENST00000535399 GP9P14770 177 aa17.21■□□□□ 0.35
SFSWAP-204ENST00000535399 CBLN1P23435 193 aa17.21■□□□□ 0.35
SFSWAP-204ENST00000535399 OR4X1Q8NH49 305 aa17.21■□□□□ 0.35
SFSWAP-204ENST00000535399 ENKURQ8TC29 256 aa17.21■□□□□ 0.35
SFSWAP-204ENST00000535399 UFC1Q9Y3C8 167 aa17.21■□□□□ 0.35
SFSWAP-204ENST00000535399 RPS10-NUDT3A0A1W2PQS6 291 aa17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 MED6O75586 246 aa17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 TMEM50AO95807 157 aa17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 IAPPP10997 89 aa17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 ELLP55199 621 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 ID3Q02535 119 aa17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 RELQ04864 619 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 DEFB114Q30KQ6 69 aa17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 OR4D5Q8NGN0 318 aa17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 MAGT1Q9H0U3 335 aa17.2■□□□□ 0.34
SFSWAP-204ENST00000535399 IZUMO1RA6ND01 250 aa17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 SYNGR2O43760 224 aa17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 C8orf88P0DMB2 117 aa17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 ATP5IP56385 69 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 CD300EQ496F6 205 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 NRARPQ7Z6K4 114 aa17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 UXS1Q8NBZ7 420 aa17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 OR2K2Q8NGT1 345 aa17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 DYNLRB2Q8TF09 96 aa17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 LSM4Q9Y4Z0 139 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-204ENST00000535399 C15orf62A8K5M9 175 aa17.18■□□□□ 0.34
SFSWAP-204ENST00000535399 CLN5O75503 358 aa17.18■□□□□ 0.34
SFSWAP-204ENST00000535399 IL5P05113 134 aa17.18■□□□□ 0.34
SFSWAP-204ENST00000535399 LCN12Q6JVE5 192 aa17.18■□□□□ 0.34
SFSWAP-204ENST00000535399 PRSS54Q6PEW0 395 aa17.18■□□□□ 0.34
SFSWAP-204ENST00000535399 MARC2Q969Z3 335 aa17.18■□□□□ 0.34
SFSWAP-204ENST00000535399 OR10C1Q96KK4 312 aa17.18■□□□□ 0.34
SFSWAP-204ENST00000535399 TECRQ9NZ01 308 aaKnown RBP17.18■□□□□ 0.34
SFSWAP-204ENST00000535399 IGHV3OR16-8A0A075B7F1 116 aa17.17■□□□□ 0.34
SFSWAP-204ENST00000535399 SLC25A4P12235 298 aa17.17■□□□□ 0.34
SFSWAP-204ENST00000535399 IAH1Q2TAA2 248 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-204ENST00000535399 DEFB121Q5J5C9 76 aa17.17■□□□□ 0.34
SFSWAP-204ENST00000535399 CIB3Q96Q77 187 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-204ENST00000535399 C20orf24Q9BUV8 137 aa17.17■□□□□ 0.34
SFSWAP-204ENST00000535399 DAZ1Q9NQZ3 744 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-204ENST00000535399 MLXQ9UH92 298 aa17.17■□□□□ 0.34
SFSWAP-204ENST00000535399 K7EMT4 169 aa17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 WRBO00258 174 aa17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 IFNA4P05014 189 aa17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 NKX2-1P43699 371 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 DEFA1P59665 94 aa17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 DEFA3P59666 94 aa17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 POLR2GP62487 172 aaKnown RBP eCLIP17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 CD69Q07108 199 aa17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 C12orf45Q8N5I9 185 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 ZBTB8BQ8NAP8 495 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 TMEM116Q8NCL8 245 aa17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 MRPL27Q9P0M9 148 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-204ENST00000535399 CCSO14618 274 aa17.15■□□□□ 0.34
SFSWAP-204ENST00000535399 ZNF207O43670 478 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-204ENST00000535399 IGKV1-17P01599 117 aa17.15■□□□□ 0.34
SFSWAP-204ENST00000535399 RND2P52198 227 aa17.15■□□□□ 0.34
SFSWAP-204ENST00000535399 ETFRF1Q6IPR1 90 aa17.15■□□□□ 0.34
SFSWAP-204ENST00000535399 ZNF600Q6ZNG1 722 aa17.15■□□□□ 0.34
SFSWAP-204ENST00000535399 SLC16A13Q7RTY0 426 aa17.15■□□□□ 0.34
SFSWAP-204ENST00000535399 SELENOKQ9Y6D0 94 aa17.15■□□□□ 0.34
SFSWAP-204ENST00000535399 ZNF785A8K8V0 405 aa17.14■□□□□ 0.33
SFSWAP-204ENST00000535399 YIF1AO95070 293 aa17.14■□□□□ 0.33
SFSWAP-204ENST00000535399 DCTN2Q13561 401 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-204ENST00000535399 BTNL8Q6UX41 500 aa17.14■□□□□ 0.33
SFSWAP-204ENST00000535399 TOMM20LQ6UXN7 152 aa17.14■□□□□ 0.33
SFSWAP-204ENST00000535399 TRAV30A0A087WSZ9 112 aa17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 IGLC1P0CG04 106 aa17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 GPX4P36969 197 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 TIGITQ495A1 244 aa17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 Q8N1Y9 231 aa17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 NPIPB3Q92617 1050 aa17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 GSKIPQ9P0R6 139 aa17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 PUS1Q9Y606 427 aaKnown RBP eCLIP17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 TGP01266 2768 aa17.13■□□□□ 0.33
SFSWAP-204ENST00000535399 INMT-MINDY4F8WBC2 141 aa17.12■□□□□ 0.33
SFSWAP-204ENST00000535399 RAB11AP62491 216 aa17.12■□□□□ 0.33
SFSWAP-204ENST00000535399 RPP30P78346 268 aaKnown RBP17.12■□□□□ 0.33
SFSWAP-204ENST00000535399 TMEM61Q8N0U2 210 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms