RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 OR51M1Q9H341 326 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 FBXL15Q9H469 300 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 SEPSECSQ9HD40 501 aaKnown RBP13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 DPM3Q9P2X0 92 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 ELOA3CA0A087WX78 387 aaPredicted RBP13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 CXorf1O96002 111 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 OR10J1P30954 320 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 PRR20EP86478 221 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 PRR20CP86479 221 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 PRR20DP86480 221 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 PRR20BP86481 221 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 PRR20AP86496 221 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 GFI1BQ5VTD9 330 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 C19orf35Q6ZS72 473 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 SLC45A2Q9UMX9 530 aa13.86□□□□□ -0.19
PCDHA6-202ENST00000527624 IGLC7A0M8Q6 106 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 PRB1P04280 392 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 LINC00869P0C866 280 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 CD24P25063 80 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 VMO1Q7Z5L0 202 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 HIST3H2BBQ8N257 126 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 TXNDC17Q9BRA2 123 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 ELOVL1Q9BW60 279 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 BPESC1Q9GZL8 116 aa13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 FNDC4Q9H6D8 234 aaPredicted RBP13.85□□□□□ -0.19
PCDHA6-202ENST00000527624 F6UZH7 168 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 NDUFB4O95168 129 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 RNF224P0DH78 156 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 AREGP15514 252 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 RPL27AP46776 148 aaKnown RBP13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 LINC01551Q86U37 167 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 PPP1R27Q86WC6 154 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 USP9XQ93008 2570 aaPredicted RBP13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 SUB1P53999 127 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 SSBP2P81877 361 aaPredicted RBP13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 PLGLAQ15195 96 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 OR4X1Q8NH49 305 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 SLC35E1Q96K37 410 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 GPR61Q9BZJ8 451 aa13.84□□□□□ -0.19
PCDHA6-202ENST00000527624 ODF3BA8MYP8 253 aa13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 FCN1O00602 326 aa13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 COMPP49747 757 aaPredicted RBP13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 PYY3Q5JQD4 70 aa13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 DERL1Q9BUN8 251 aa13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 DOPEY1Q5JWR5 2465 aa13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 PPP5D1E7EU14 171 aa13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 RHOBP62745 196 aa13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 CACNG8Q8WXS5 425 aa13.83□□□□□ -0.2
PCDHA6-202ENST00000527624 WNK2Q9Y3S1 2297 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 LINC00587B1AMM8 73 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 OVOL3O00110 214 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 GPX4P36969 197 aaPredicted RBP13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 CEACAM3P40198 252 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 MMDQ15546 238 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 SSX2Q16385 188 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 PDZD11Q5EBL8 140 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 OR5T1Q8NG75 326 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 RNASEH2CQ8TDP1 164 aaKnown RBP13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 MRPL36Q9P0J6 103 aaKnown RBP13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 MYO18BQ8IUG5 2567 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 A0A1W2PPQ1 181 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 GGCTO75223 188 aaKnown RBP13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 FOXH1O75593 365 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 IGHV4-39P01824 125 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 CD99P14209 185 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 SRP14P37108 136 aaKnown RBP13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 FBLN7Q53RD9 439 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 FAM78BQ5VT40 261 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 MIR17HGQ75NE6 70 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 OR10D4PQ8NGN7 298 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 CFHR4Q92496 578 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 NPIPB3Q92617 1050 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 MISP3Q96FF7 219 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 PITPNC1Q9UKF7 332 aa13.82□□□□□ -0.2
PCDHA6-202ENST00000527624 SVEP1Q4LDE5 3571 aa13.81□□□□□ -0.2
PCDHA6-202ENST00000527624 GCHFRP30047 84 aa13.81□□□□□ -0.2
PCDHA6-202ENST00000527624 MFAP2P55001 183 aa13.81□□□□□ -0.2
PCDHA6-202ENST00000527624 LGALS4P56470 323 aa13.81□□□□□ -0.2
PCDHA6-202ENST00000527624 CLEC12BQ2HXU8 276 aa13.81□□□□□ -0.2
PCDHA6-202ENST00000527624 OR2T10Q8NGZ9 312 aa13.81□□□□□ -0.2
PCDHA6-202ENST00000527624 HOXB4P17483 251 aaPredicted RBP13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 FAM3BP58499 235 aaPredicted RBP13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 C1orf122Q6ZSJ8 110 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 KIR3DL3Q8N743 410 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 AURKAIP1Q9NWT8 199 aaPredicted RBP13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 TRBV20OR9-2A0A075B6H5 130 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 TEX22C9J3V5 150 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 LMO4P61968 165 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 PAX2Q02962 417 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 HES1Q14469 280 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 RUSC1-AS1Q66K80 236 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 DYNAPQ8N1N2 210 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 ZNF114Q8NC26 417 aa13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 YTHDF2Q9Y5A9 579 aaKnown RBP13.8□□□□□ -0.2
PCDHA6-202ENST00000527624 IGHV3-21A0A0B4J1V1 117 aa13.79□□□□□ -0.2
PCDHA6-202ENST00000527624 MRPL41Q8IXM3 137 aaKnown RBP13.79□□□□□ -0.2
PCDHA6-202ENST00000527624 SRSF12Q8WXF0 261 aaKnown RBP13.79□□□□□ -0.2
PCDHA6-202ENST00000527624 RNF5Q99942 180 aa13.79□□□□□ -0.2
PCDHA6-202ENST00000527624 SIRPDQ9H106 197 aa13.79□□□□□ -0.2
PCDHA6-202ENST00000527624 LPAR2Q9HBW0 351 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms