RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ZNF705AQ6ZN79 300 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 PXT1Q8NFP0 134 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 ACOT12Q8WYK0 555 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 VCX3BQ9H321 246 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 C11orf68Q9H3H3 251 aaKnown RBP2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 C14orf105Q9NVL8 296 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 TP73-AS1Q9UF72 201 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 ABCC3O15438 1527 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 ARHGEF5Q12774 1597 aa2.4□□□□□ -2.03
HMGB1P47-201ENST00000511281 POLR1AO95602 1720 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 MED14O60244 1454 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 ERVK-7P63135 1459 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 ROCK2O75116 1388 aaKnown RBP2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 STRCP1A6NGW2 1772 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 CPS1P31327 1500 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 LRRC7Q96NW7 1537 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 FAM135AQ9P2D6 1515 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 IGLV3-9A0A075B6K5 115 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 TMSB15BA0A087X1C1 80 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 PIRO00625 290 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 IFNA10P01566 189 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 SERPINE1P05121 402 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 HES1Q14469 280 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 DHRS4L2Q6PKH6 230 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 MCFD2Q8NI22 146 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 KIFC1Q9BW19 673 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 TTTY12Q9BZ98 90 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 RNF122Q9H9V4 155 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 PARVBQ9HBI1 364 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 RALGAPBQ86X10 1494 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 NLRP1Q9C000 1473 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 DEPDC5O75140 1603 aa2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 RNF17Q9BXT8 1623 aaKnown RBP2.39□□□□□ -2.03
HMGB1P47-201ENST00000511281 DUOX2Q9NRD8 1548 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 IQGAP1P46940 1657 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 TRAV9-1A0A075B6T8 112 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 TRAV38-1A0A0B4J264 116 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 CEP152O94986 1710 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 NFYAP23511 347 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 ZNF80P51504 273 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 UBR1Q8IWV7 1749 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 DOCK3Q8IZD9 2030 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 OR4X2Q8NGF9 303 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 RASSF5Q8WWW0 418 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 H1FXQ92522 213 aaKnown RBP2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 UQCC1Q9NVA1 299 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 ARMC1Q9NVT9 282 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 NAT8Q9UHE5 227 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 MAST1Q9Y2H9 1570 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 MAST2Q6P0Q8 1798 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 SCAF11Q99590 1463 aaKnown RBP2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 TTC21AQ8NDW8 1320 aa2.38□□□□□ -2.03
HMGB1P47-201ENST00000511281 ZC3H13Q5T200 1668 aaKnown RBP2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 NOTCH2Q04721 2471 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 PRDM15P57071 1507 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 RTL1A6NKG5 1358 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 PLXNA3P51805 1871 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 BAHCC1Q9P281 2608 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 ARRDC5A6NEK1 342 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 GGT3PA6NGU5 568 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 C19orf84I3L1E1 186 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 HINT1P49773 126 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 ERHP84090 104 aaKnown RBP2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 RELAQ04206 551 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 GLO1Q04760 184 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 SPANXN3Q5MJ09 141 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 TXNDC17Q9BRA2 123 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 PIK3C2BO00750 1634 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 EIF2AK4Q9P2K8 1649 aaKnown RBP2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 CUL9Q8IWT3 2517 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 SLIT1O75093 1534 aa2.37□□□□□ -2.03
HMGB1P47-201ENST00000511281 TMEM2Q9UHN6 1383 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 SYNMO15061 1565 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 ARHGAP31Q2M1Z3 1444 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 XIRP1Q702N8 1843 aaKnown RBP2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 ZNF705FA8MVS1 300 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 H3BRN7 92 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 SLC22A1O15245 554 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 C8GP07360 202 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 MAGEA12P43365 314 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 FXYD2P54710 66 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 TAF1AQ15573 450 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 MOGQ16653 247 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 SLC36A1Q7Z2H8 476 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 OR11H6Q8NGC7 330 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 C2orf50Q96LR7 162 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 TMEM106BQ9NUM4 274 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 STOML2Q9UJZ1 356 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 CROCC2H7BZ55 1655 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 MDC1Q14676 2089 aaKnown RBP2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 EFCAB6Q5THR3 1501 aa2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 KTN1Q86UP2 1357 aaKnown RBP2.36□□□□□ -2.03
HMGB1P47-201ENST00000511281 FAM135BQ49AJ0 1406 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 TET3O43151 1660 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 ROBO1Q9Y6N7 1651 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 TRBV10-2A0A0K0K1G8 114 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 OR51F1A6NGY5 319 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 SIGLEC16A6NMB1 481 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 OR2J2O76002 312 aa2.35□□□□□ -2.03
HMGB1P47-201ENST00000511281 PPIBP23284 216 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms