RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 SCGB3A1Q96QR1 104 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 HIST1H2BNQ99877 126 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 HIST1H2BMQ99879 126 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 PAIP2Q9BPZ3 127 aaKnown RBP0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 TMEM147Q9BVK8 224 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 C14orf105Q9NVL8 296 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 FAM32AQ9Y421 112 aaKnown RBP0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 TMEM56-RWDD3S4R434 201 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 RTL1A6NKG5 1358 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 NUP155O75694 1391 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 KIF24Q5T7B8 1368 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 DOCK5Q9H7D0 1870 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 PTPRSQ13332 1948 aa0.64□□□□□ -2.31
UBE2D3-218ENST00000505009 ROS1P08922 2347 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 hCG_1818297A0A087WSY0 165 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 A0A0D9SG52 128 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 TRBV10-2A0A0K0K1G8 114 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 EXOC1LA0A1B0GW35 172 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 OR51F1A6NGY5 319 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 OR4C46A6NHA9 309 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 A8MT66 165 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 BUB1B-PAK6H3BSN5 160 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 HAND1O96004 215 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 TTRP02766 147 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 PPIBP23284 216 aaKnown RBP0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 CASP1P29466 404 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 FXYD2P54710 66 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 YPEL3P61236 119 aaPredicted RBP0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 CCL20P78556 96 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 TAF1AQ15573 450 aaPredicted RBP0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 KHDC3LQ587J8 217 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 LYRM7Q5U5X0 104 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 MIR17HGQ75NE6 70 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 DYNAPQ8N1N2 210 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 Q8N2B8 174 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 FAM19A2Q8N3H0 131 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 GDPD1Q8N9F7 314 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 OR8B3Q8NGG8 313 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 OR51A2Q8NGJ7 313 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 GNPDA2Q8TDQ7 276 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 TSPAN32Q96QS1 320 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 SERPINI1Q99574 410 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 SIGMAR1Q99720 223 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 DERL1Q9BUN8 251 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 TLNRD1Q9H1K6 362 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 DCSTAMPQ9H295 470 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 PSTPIP2Q9H939 334 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 ENY2Q9NPA8 101 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 FBXL12Q9NXK8 326 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 CKLFQ9UBR5 152 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 STOML2Q9UJZ1 356 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 FBXO5Q9UKT4 447 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 PRELID3BQ9Y3B1 194 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 TIMM22Q9Y584 194 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 GREB1Q4ZG55 1949 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 PIK3C2GO75747 1445 aa0.63□□□□□ -2.31
UBE2D3-218ENST00000505009 COL4A5P29400 1685 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 NUMA1Q14980 2115 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 NEO1Q92859 1461 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 BAZ2BQ9UIF8 2168 aaKnown RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 TRAV26-2A0A0B4J265 109 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 hADV38S2A0JD32 116 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 FAM159BA6NKW6 160 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 HCRTO43612 131 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 SULT1B1O43704 296 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 OR2B3O76000 313 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 OR7C1O76099 320 aaPredicted RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 OR5F1O95221 314 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 TCL1BO95988 128 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 SERPINE1P05121 402 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 C8GP07360 202 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 UBBP0CG47 229 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 HSD11B1P28845 292 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 ERP29P30040 261 aaKnown RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 SRIP30626 198 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 SERPINB9P50453 376 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 ZNF80P51504 273 aaPredicted RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 RHOBP62745 196 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 IAH1Q2TAA2 248 aaPredicted RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 FAM27BQ5VT28 67 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 TEX36Q5VZQ5 186 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 BPIFA4PQ86YQ2 179 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 CLVS1Q8IUQ0 354 aaPredicted RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 HIST3H2BBQ8N257 126 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 EXOC3-AS1Q8N2X6 119 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 ZNF439Q8NDP4 499 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 OR4E2Q8NGC2 313 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 OR4D11Q8NGI4 311 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 FAM172AQ8WUF8 416 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 H1FXQ92522 213 aaKnown RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 ZC2HC1AQ96GY0 325 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 C2orf50Q96LR7 162 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 NIPSNAP1Q9BPW8 284 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 MRPL57Q9BQC6 102 aaKnown RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 YIPF3Q9GZM5 350 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 C11orf68Q9H3H3 251 aaKnown RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 OSTCQ9NRP0 149 aa0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 NHP2Q9NX24 153 aaKnown RBP0.62□□□□□ -2.31
UBE2D3-218ENST00000505009 OPTCQ9UBM4 332 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms