RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, human

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-206	ENST00000487602	ZNF355P	Q9NSJ1	428 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	SERTAD4	Q9NUC0	356 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	THYN1	Q9P016	225 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	WDR83OS	Q9Y284	106 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	ZFHX3	Q15911	3703 aa		6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	TEP1	Q99973	2627 aa	Known RBP	6.26	□□□□□ -1.41
RBM28-206	ENST00000487602	IGHV3-21	A0A0B4J1V1	117 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	UBE2L5P	A0A1B0GUS4	154 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	SMCO3	A2RU48	225 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	TMEM89	A2RUT3	159 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	IGLV1-40	P01703	118 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	IGHG4	P01861	327 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	TPT1	P13693	172 aa	Known RBP	6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	RHOG	P84095	191 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	AKR1C1	Q04828	323 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	LINC01559	Q495D7	138 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	BTNL8	Q6UX41	500 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	NECAP1	Q8NC96	275 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	VN1R17P	Q8TDU5	208 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	SCARB1	Q8WTV0	552 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	ST8SIA2	Q92186	375 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	NPIPB3	Q92617	1050 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	TAF15	Q92804	592 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	MS4A10	Q96PG2	267 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	GINS3	Q9BRX5	216 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	WDR61	Q9GZS3	305 aa	Known RBP	6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	C16orf95	Q9H693	158 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	SLA2	Q9H6Q3	261 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	MRPL36	Q9P0J6	103 aa	Known RBP	6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	FBXL7	Q9UJT9	491 aa		6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	LSM4	Q9Y4Z0	139 aa	Known RBP	6.25	□□□□□ -1.41
RBM28-206	ENST00000487602	PSMB11	A5LHX3	300 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	FAM223B	A6NKX1	122 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	MPDU1	O75352	247 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	NDUFA7	O95182	113 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	CFD	P00746	253 aa	Predicted RBP	6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	IGHV3-48	P01763	117 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	TRGV3	P03979	118 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	FGF7	P21781	194 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	ATP6V0C	P27449	155 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	RAB9A	P51151	201 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	RND2	P52198	227 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	MFAP4	P55083	255 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	SLC35B1	P78383	322 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	IFITM2	Q01629	132 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	ATP5G2	Q06055	141 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	ACSM6	Q6P461	480 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	TEPP	Q6URK8	271 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	CENPV	Q7Z7K6	275 aa	Predicted RBP	6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	ZNF329	Q86UD4	541 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	FAM223A	Q8IWN6	122 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	THAP8	Q8NA92	274 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	HSD17B11	Q8NBQ5	300 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	TMEM116	Q8NCL8	245 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	OR4X1	Q8NH49	305 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	GNPNAT1	Q96EK6	184 aa	Predicted RBP	6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	ACY3	Q96HD9	319 aa		6.24	□□□□□ -1.41
RBM28-206	ENST00000487602	IGKV1D-37	A0A075B6S9	117 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	IGKV1OR2-108	A0A075B7D4	117 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	MFSD2B	A6NFX1	497 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	AGPAT2	O15120	278 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	CLN5	O75503	358 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	ELANE	P08246	267 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	SEC11B	P0C7V7	166 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	SPP1	P10451	314 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	PF4V1	P10720	104 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	PSMB8	P28062	276 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	FCGR2B	P31994	310 aa	Predicted RBP	6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	NPBWR1	P48145	328 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	CAMLG	P49069	296 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	TPPP2	P59282	170 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	RUNX1	Q01196	453 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	DEFA5	Q01523	94 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	FOXE3	Q13461	319 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	RAB31	Q13636	194 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	C15orf32	Q32M92	178 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	C4orf48	Q5BLP8	95 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	TEX38	Q6PEX7	206 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	TEX261	Q6UWH6	196 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	C10orf99	Q6UWK7	81 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	COMMD1	Q8N668	190 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	ZNF502	Q8TBZ5	544 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	PHYHIPL	Q96FC7	376 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	USMG5	Q96IX5	58 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	CXorf58	Q96LI9	332 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	TRGV9	Q99603	122 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	MGST2	Q99735	147 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	TXN2	Q99757	166 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	PSMG3	Q9BT73	122 aa	Predicted RBP	6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	NPCDR1	Q9BY65	106 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	SLC25A32	Q9H2D1	315 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	KLK15	Q9H2R5	256 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	C21orf62	Q9NYP8	219 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	SLC45A2	Q9UMX9	530 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	TIMM9	Q9Y5J7	89 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	RFNG	Q9Y644	331 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602		S4R3C0	116 aa		6.23	□□□□□ -1.41
RBM28-206	ENST00000487602	TRAV30	A0A087WSZ9	112 aa		6.22	□□□□□ -1.41
RBM28-206	ENST00000487602	TRBV7-1	A0A0A6YYK4	115 aa		6.22	□□□□□ -1.41
RBM28-206	ENST00000487602		A0A0G2JLM5	398 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms