RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SCGB2A1O75556 95 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 LHBP01229 141 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 IL6RP08887 468 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 MC5RP33032 325 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 RPS10P46783 165 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 FGF8P55075 233 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 LINC00310P59036 64 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 ODF1Q14990 250 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 ZNF329Q86UD4 541 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 BEND2Q8NDZ0 799 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 FAM210BQ96KR6 192 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 PSENENQ9NZ42 101 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 ADGRG4Q8IZF6 3080 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 UTP20O75691 2785 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 PSMB11A5LHX3 300 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 C12orf77C9JDV5 145 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 TMEM250H0YL14 139 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 YPEL1O60688 119 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 CGB3P0DN86 165 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 CGB7P0DN87 165 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 GZMBP10144 247 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 TNXAQ16473 311 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 AKR1C8PQ5T2L2 129 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 UNQ5815/PRO19632Q6UWF5 114 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 KLHDC1Q8N7A1 406 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 HARBI1Q96MB7 349 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 YPEL2Q96QA6 119 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 ACTR3CQ9C0K3 210 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 GAR1Q9NY12 217 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 GNG13Q9P2W3 67 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 SOX21Q9Y651 276 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 AMBPP02760 352 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 APELAP0DMC3 54 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 HLA-DRB5Q30154 266 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 APCP25054 2843 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 TRBV20OR9-2A0A075B6H5 130 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 C17orf98A8MV24 154 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 CLDN34H7C241 214 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 IAPPP10997 89 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 LINC00205P59089 165 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 MEF2BQ02080 365 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 UTF1Q5T230 341 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 KRTAP1-3Q8IUG1 177 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 TMEM183AQ8IXX5 376 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 ZBTB34Q8NCN2 500 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR4F17Q8NGA8 305 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR5AU1Q8NGC0 362 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 DDB2Q92466 427 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 MS4A10Q96PG2 267 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR4F4Q96R69 305 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 MOB4Q9Y3A3 225 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 HOXB4P17483 251 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 VAMP2P63027 116 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 JOSD1Q15040 202 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 KRTAP24-1Q3LI83 254 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 TMEM30BQ3MIR4 351 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 TPTE2P1Q5T6R2 138 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 STX12Q86Y82 276 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR10G8Q8NGN5 311 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 FAM216AQ8WUB2 273 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 PINX1Q96BK5 328 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 ELOVL1Q9BW60 279 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 LIN7CQ9NUP9 197 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 JPT1Q9UK76 154 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 TP53TG3Q9ULZ0 132 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 SIGLEC9Q9Y336 463 aa5.92□□□□□ -1.46
CDC42BPA-208ENST00000442054 TNFRSF13BO14836 293 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 ZNF737O75373 536 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 MOSP00540 346 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 NDUFA6P56556 154 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 GAMTQ14353 236 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 SGMS2Q8NHU3 365 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 IGFBPL1Q8WX77 278 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 ADTRPQ96IZ2 230 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 NPCDR1Q9BY65 106 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 NAT8Q9UHE5 227 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 LSM4Q9Y4Z0 139 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 URGCP-MRPS24S4R325 110 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 DCHS2Q6V1P9 2916 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 PIGBOS1A0A0B4J2F0 54 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 MAP1LC3B2A6NCE7 125 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 OOSP1A8MZH6 123 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 TGOLN2O43493 480 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 S1PR2O95136 353 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 LOXL3P58215 753 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 SLC38A11Q08AI6 406 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 C16orf82Q7Z2V1 217 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 MAP1LC3BQ9GZQ8 125 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 WASHC3Q9Y3C0 194 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 FAM90A9PA6NNJ1 464 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 HRASP01112 189 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 RAB11AP62491 216 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 TNFRSF14Q92956 283 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 EAF1Q96JC9 268 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 SIRPDQ9H106 197 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 PARLQ9H300 379 aa5.91□□□□□ -1.46
CDC42BPA-208ENST00000442054 RELNP78509 3460 aa5.9□□□□□ -1.46
CDC42BPA-208ENST00000442054 ZNF320A2RRD8 509 aa5.9□□□□□ -1.46
CDC42BPA-208ENST00000442054 A8MWP6 167 aa5.9□□□□□ -1.46
CDC42BPA-208ENST00000442054 BUB1B-PAK6H3BSN5 160 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms