RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SSX2Q16385 188 aa14.98□□□□□ -0.01
CLK1-205ENST00000434813 MRGPRG-AS1Q2M3A8 158 aa14.98□□□□□ -0.01
CLK1-205ENST00000434813 SLC25A2Q9BXI2 301 aa14.98□□□□□ -0.01
CLK1-205ENST00000434813 TPSG1Q9NRR2 321 aa14.98□□□□□ -0.01
CLK1-205ENST00000434813 ARFGEF3Q5TH69 2177 aa14.98□□□□□ -0.01
CLK1-205ENST00000434813 SMG1Q96Q15 3661 aaKnown RBP14.97□□□□□ -0.01
CLK1-205ENST00000434813 A0A1W2PPI3 338 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 FAM90A27PA6NNH2 459 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 OR10J4P0C629 311 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 PPOXP50336 477 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 SSBP2P81877 361 aaPredicted RBP14.97□□□□□ -0.01
CLK1-205ENST00000434813 ZNF90Q03938 601 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 THAP8Q8NA92 274 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 PCNX1Q96RV3 2341 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 TCRBV4S1A1TA0A5B7 111 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 OR1L4Q8NGR5 311 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 TMEM18Q96B42 140 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 DNAJC4Q9NNZ3 241 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 RALYQ9UKM9 306 aaKnown RBP14.97□□□□□ -0.01
CLK1-205ENST00000434813 V9GYV3 84 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 PKDREJQ9NTG1 2253 aa14.97□□□□□ -0.01
CLK1-205ENST00000434813 IGKV1D-37A0A075B6S9 117 aa14.96□□□□□ -0.01
CLK1-205ENST00000434813 SLC17A3O00476 420 aa14.96□□□□□ -0.01
CLK1-205ENST00000434813 UBE2L3P68036 154 aaKnown RBP14.96□□□□□ -0.01
CLK1-205ENST00000434813 MORN5Q5VZ52 161 aa14.96□□□□□ -0.01
CLK1-205ENST00000434813 RITA1Q96K30 269 aa14.96□□□□□ -0.01
CLK1-205ENST00000434813 IGHV2-26A0A0B4J1V2 119 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 COX7A2P2O60397 106 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 FSTL3O95633 263 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 IGLV1-47P01700 117 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 BPIFB3P59826 476 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 ERVFC1-1P60608 527 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 SELENOTP62341 195 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 C9orf152Q5JTZ5 239 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 FAM209BQ5JX69 171 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 PVRIGQ6DKI7 326 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 MRPL41Q8IXM3 137 aaKnown RBP14.95□□□□□ -0.02
CLK1-205ENST00000434813 TEX45Q8NA69 505 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 NPIPB3Q92617 1050 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 POLEQ07864 2286 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 IGLC7A0M8Q6 106 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 PLAUP00749 431 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 GZMBP10144 247 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 LGALS4P56470 323 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 RPEL1Q2QD12 228 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 FBXL19-AS1Q494R0 122 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 GBGT1Q8N5D6 347 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 OR5AU1Q8NGC0 362 aa14.95□□□□□ -0.02
CLK1-205ENST00000434813 ITPR1Q14643 2758 aa14.94□□□□□ -0.02
CLK1-205ENST00000434813 SUMO1P63165 101 aaKnown RBP14.94□□□□□ -0.02
CLK1-205ENST00000434813 OR5I1Q13606 314 aa14.94□□□□□ -0.02
CLK1-205ENST00000434813 TIGITQ495A1 244 aa14.94□□□□□ -0.02
CLK1-205ENST00000434813 C10orf113Q5VZT2 155 aa14.94□□□□□ -0.02
CLK1-205ENST00000434813 MMD2Q8IY49 270 aa14.94□□□□□ -0.02
CLK1-205ENST00000434813 IGF2BP2-AS1Q96M15 143 aa14.94□□□□□ -0.02
CLK1-205ENST00000434813 CACNA1BQ00975 2339 aa14.94□□□□□ -0.02
CLK1-205ENST00000434813 IGHV3-72A0A0B4J1Y9 119 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 TRAV5A0A0B4J249 113 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 ENSAO43768 121 aaKnown RBP14.93□□□□□ -0.02
CLK1-205ENST00000434813 GCGP01275 180 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 ADMP35318 185 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 PKIAP61925 76 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 ZNF841Q6ZN19 808 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 OSTCQ9NRP0 149 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 ZNF355PQ9NSJ1 428 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 MRPL36Q9P0J6 103 aaKnown RBP14.93□□□□□ -0.02
CLK1-205ENST00000434813 ATRXP46100 2492 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 RBP4P02753 201 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 CRYGCP07315 174 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 CRYGBP07316 175 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 PRRX1P54821 245 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 ETFRF1Q6IPR1 90 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 MUC15Q8N387 334 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 NAV3Q8IVL0 2385 aa14.93□□□□□ -0.02
CLK1-205ENST00000434813 REG1AP05451 166 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 PATE2Q6UY27 113 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 BEND2Q8NDZ0 799 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 LINC01560Q8TB33 94 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 KALRNO60229 2985 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 IGLV2-8P01709 118 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 CBLN1P23435 193 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 RPL27AP46776 148 aaKnown RBP14.92□□□□□ -0.02
CLK1-205ENST00000434813 ADORA2A-AS1P86434 159 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 PAXXQ9BUH6 204 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 CLEC7AQ9BXN2 247 aa14.92□□□□□ -0.02
CLK1-205ENST00000434813 TRBV9A0A0B4J1U6 114 aa14.91□□□□□ -0.02
CLK1-205ENST00000434813 IGHV1-3A0A0C4DH29 117 aa14.91□□□□□ -0.02
CLK1-205ENST00000434813 LYNX1G3V0Z9 82 aa14.91□□□□□ -0.02
CLK1-205ENST00000434813 TSTD3H0UI37 97 aa14.91□□□□□ -0.02
CLK1-205ENST00000434813 ISLRO14498 428 aa14.91□□□□□ -0.02
CLK1-205ENST00000434813 IGHV3-48P01763 117 aa14.91□□□□□ -0.02
CLK1-205ENST00000434813 LYNX1P0DP58 116 aa14.91□□□□□ -0.02
CLK1-205ENST00000434813 CDC42EP3Q9UKI2 254 aa14.91□□□□□ -0.02
CLK1-205ENST00000434813 BUB1B-PAK6H3BSN5 160 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 SIAH2O43255 324 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 PYYP10082 97 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 TAS2R60P59551 318 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 TNXAQ16473 311 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 OR1L6Q8NGR2 347 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 C8orf46Q8TAG6 207 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms