RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 IGHV3-35A0A0C4DH35 117 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 K7EMT4 169 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 PLA2G10O15496 165 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 TCRBP04435 133 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 CTSGP08311 255 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 SLC25A4P12235 298 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 NPY1RP25929 384 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 BMI1P35226 326 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 RAB11AP62491 216 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 DHRS2Q13268 280 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 DEFB114Q30KQ6 69 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 BSXQ3C1V8 233 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 LAMTOR1Q6IAA8 161 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 RBPMS2Q6ZRY4 209 aaKnown RBP11.17□□□□□ -0.62
CHD1-202ENST00000414220 HAPLN4Q86UW8 402 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 UXS1Q8NBZ7 420 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 GINS3Q9BRX5 216 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 RBKSQ9H477 322 aa11.17□□□□□ -0.62
CHD1-202ENST00000414220 LSM4Q9Y4Z0 139 aaKnown RBP11.17□□□□□ -0.62
CHD1-202ENST00000414220 TMEM213A2RRL7 107 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 C15orf62A8K5M9 175 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 IGHV3-48P01763 117 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 IFNA4P05014 189 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
CHD1-202ENST00000414220 BTCP35070 178 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 CD300EQ496F6 205 aaPredicted RBP11.16□□□□□ -0.62
CHD1-202ENST00000414220 TM4SF20Q53R12 229 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 GGNBP1Q5YKI7 109 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 B9D2Q9BPU9 175 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 CHRDL1Q9BU40 450 aa11.16□□□□□ -0.62
CHD1-202ENST00000414220 TRAV25A0A0B4J276 109 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 WRBO00258 174 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 CLN5O75503 358 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 TMEM50AO95807 157 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 GUCA2BQ16661 112 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 UNQ9165/PRO28630Q6UXU0 137 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 OR4X1Q8NH49 305 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 ENKURQ8TC29 256 aa11.15□□□□□ -0.62
CHD1-202ENST00000414220 TRAV6A0A075B6T7 132 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 TRAV14DV4A0A0A6YYC5 116 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 F8W735 103 aaPredicted RBP11.14□□□□□ -0.63
CHD1-202ENST00000414220 PITX3O75364 302 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 UPK1BO75841 260 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 H2AFB2P0C5Z0 115 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 NHLRC4P0CG21 123 aaPredicted RBP11.14□□□□□ -0.63
CHD1-202ENST00000414220 C8orf88P0DMB2 117 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 ADMP35318 185 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 DEFA1P59665 94 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 DEFA3P59666 94 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 ASAH1Q13510 395 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 SLC16A13Q7RTY0 426 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 MITD1Q8WV92 249 aa11.14□□□□□ -0.63
CHD1-202ENST00000414220 SYNGR2O43760 224 aa11.13□□□□□ -0.63
CHD1-202ENST00000414220 NKX2-1P43699 371 aaPredicted RBP11.13□□□□□ -0.63
CHD1-202ENST00000414220 BTNL8Q6UX41 500 aa11.13□□□□□ -0.63
CHD1-202ENST00000414220 ADAMTSL5Q6ZMM2 481 aa11.13□□□□□ -0.63
CHD1-202ENST00000414220 OR1S2Q8NGQ3 325 aa11.13□□□□□ -0.63
CHD1-202ENST00000414220 CACNG8Q8WXS5 425 aa11.13□□□□□ -0.63
CHD1-202ENST00000414220 NARS2Q96I59 477 aaKnown RBP11.13□□□□□ -0.63
CHD1-202ENST00000414220 TUBA4BQ9H853 241 aa11.13□□□□□ -0.63
CHD1-202ENST00000414220 NUDT15Q9NV35 164 aa11.13□□□□□ -0.63
CHD1-202ENST00000414220 PAIP2BQ9ULR5 123 aaKnown RBP11.13□□□□□ -0.63
CHD1-202ENST00000414220 CD5P06127 495 aa11.12□□□□□ -0.63
CHD1-202ENST00000414220 GPX4P36969 197 aaPredicted RBP11.12□□□□□ -0.63
CHD1-202ENST00000414220 CD81P60033 236 aa11.12□□□□□ -0.63
CHD1-202ENST00000414220 Q8WTZ3 238 aa11.12□□□□□ -0.63
CHD1-202ENST00000414220 SLC35E1Q96K37 410 aa11.12□□□□□ -0.63
CHD1-202ENST00000414220 FNDC4Q9H6D8 234 aaPredicted RBP11.12□□□□□ -0.63
CHD1-202ENST00000414220 TMEM231Q9H6L2 316 aa11.12□□□□□ -0.63
CHD1-202ENST00000414220 SORL1Q92673 2214 aa11.12□□□□□ -0.63
CHD1-202ENST00000414220 A0A1W2PS18 150 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 IZUMO1RA6ND01 250 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 ADAP1O75689 374 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 FABP1P07148 127 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 IAPPP10997 89 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 RND2P52198 227 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 MLANAQ16655 118 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 PRSS54Q6PEW0 395 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 TOMM20LQ6UXN7 152 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 OR52B4Q8NGK2 314 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 ZNF431Q8TF32 576 aaPredicted RBP11.11□□□□□ -0.63
CHD1-202ENST00000414220 OR10C1Q96KK4 312 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 NEURL2Q9BR09 285 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 MAGT1Q9H0U3 335 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
CHD1-202ENST00000414220 MLXQ9UH92 298 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 SMPXQ9UHP9 88 aa11.11□□□□□ -0.63
CHD1-202ENST00000414220 PUS1Q9Y606 427 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHD1-202ENST00000414220 IGHV7-4-1A0A0J9YVY3 117 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 ZNF207O43670 478 aaKnown RBP11.1□□□□□ -0.63
CHD1-202ENST00000414220 SCAF4O95104 1147 aaKnown RBP11.1□□□□□ -0.63
CHD1-202ENST00000414220 NPPCP23582 126 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 OR10J1P30954 320 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 PAFAH1B2P68402 229 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 IAH1Q2TAA2 248 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms