RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 UNQ9165/PRO28630Q6UXU0 137 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 MAGT1Q9H0U3 335 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 PEMTQ9UBM1 199 aa17■□□□□ 0.31
PTCD3-203ENST00000409783 PRKDCP78527 4128 aaKnown RBP17■□□□□ 0.31
PTCD3-203ENST00000409783 SYNGR2O43760 224 aa16.99■□□□□ 0.31
PTCD3-203ENST00000409783 HAPLN4Q86UW8 402 aa16.99■□□□□ 0.31
PTCD3-203ENST00000409783 C12orf45Q8N5I9 185 aaPredicted RBP16.99■□□□□ 0.31
PTCD3-203ENST00000409783 RNASEH2CQ8TDP1 164 aaKnown RBP16.99■□□□□ 0.31
PTCD3-203ENST00000409783 MARVELD1Q9BSK0 173 aa16.99■□□□□ 0.31
PTCD3-203ENST00000409783 GAR1Q9NY12 217 aaKnown RBP16.99■□□□□ 0.31
PTCD3-203ENST00000409783 TMEM213A2RRL7 107 aa16.98■□□□□ 0.31
PTCD3-203ENST00000409783 C2orf70A6NJV1 201 aa16.98■□□□□ 0.31
PTCD3-203ENST00000409783 MED6O75586 246 aa16.98■□□□□ 0.31
PTCD3-203ENST00000409783 IFNA10P01566 189 aa16.98■□□□□ 0.31
PTCD3-203ENST00000409783 IAPPP10997 89 aa16.98■□□□□ 0.31
PTCD3-203ENST00000409783 OPRK1P41145 380 aa16.98■□□□□ 0.31
PTCD3-203ENST00000409783 WI2-2373I1.2A0A1W2PRP0 233 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 C15orf62A8K5M9 175 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 INMT-MINDY4F8WBC2 141 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 K7EIL1 84 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 CCSO14618 274 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 SPNP16150 400 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 ATP5IP56385 69 aaPredicted RBP16.97■□□□□ 0.31
PTCD3-203ENST00000409783 IAH1Q2TAA2 248 aaPredicted RBP16.97■□□□□ 0.31
PTCD3-203ENST00000409783 NOXA1Q86UR1 476 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 ZBTB8BQ8NAP8 495 aaPredicted RBP16.97■□□□□ 0.31
PTCD3-203ENST00000409783 OR4X1Q8NH49 305 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 TMEM190Q8WZ59 177 aa16.97■□□□□ 0.31
PTCD3-203ENST00000409783 ZMAT5Q9UDW3 170 aaKnown RBP16.97■□□□□ 0.31
PTCD3-203ENST00000409783 ZNF320A2RRD8 509 aa16.96■□□□□ 0.31
PTCD3-203ENST00000409783 NDUFA4O00483 81 aa16.96■□□□□ 0.31
PTCD3-203ENST00000409783 GNG7O60262 68 aa16.96■□□□□ 0.31
PTCD3-203ENST00000409783 TMEM50AO95807 157 aa16.96■□□□□ 0.31
PTCD3-203ENST00000409783 NKX2-1P43699 371 aaPredicted RBP16.96■□□□□ 0.31
PTCD3-203ENST00000409783 NPBWR1P48145 328 aa16.96■□□□□ 0.31
PTCD3-203ENST00000409783 WRBO00258 174 aa16.95■□□□□ 0.3
PTCD3-203ENST00000409783 NUPL2O15504 423 aaKnown RBP16.95■□□□□ 0.3
PTCD3-203ENST00000409783 FOLR2P14207 255 aa16.95■□□□□ 0.3
PTCD3-203ENST00000409783 POLR2GP62487 172 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTCD3-203ENST00000409783 TM4SF20Q53R12 229 aa16.95■□□□□ 0.3
PTCD3-203ENST00000409783 PRSS54Q6PEW0 395 aa16.95■□□□□ 0.3
PTCD3-203ENST00000409783 UXS1Q8NBZ7 420 aa16.95■□□□□ 0.3
PTCD3-203ENST00000409783 CIB3Q96Q77 187 aaPredicted RBP16.95■□□□□ 0.3
PTCD3-203ENST00000409783 ZNF256Q9Y2P7 627 aaPredicted RBP16.95■□□□□ 0.3
PTCD3-203ENST00000409783 RPS10-NUDT3A0A1W2PQS6 291 aa16.94■□□□□ 0.3
PTCD3-203ENST00000409783 PRAF2O60831 178 aa16.94■□□□□ 0.3
PTCD3-203ENST00000409783 CLN5O75503 358 aa16.94■□□□□ 0.3
PTCD3-203ENST00000409783 C8orf88P0DMB2 117 aa16.94■□□□□ 0.3
PTCD3-203ENST00000409783 CBLN1P23435 193 aa16.94■□□□□ 0.3
PTCD3-203ENST00000409783 ELLP55199 621 aaPredicted RBP16.94■□□□□ 0.3
PTCD3-203ENST00000409783 CD69Q07108 199 aa16.94■□□□□ 0.3
PTCD3-203ENST00000409783 CACNG8Q8WXS5 425 aa16.94■□□□□ 0.3
PTCD3-203ENST00000409783 PRR25Q96S07 402 aa16.94■□□□□ 0.3
PTCD3-203ENST00000409783 SNRPGP15A8MWD9 76 aa16.93■□□□□ 0.3
PTCD3-203ENST00000409783 SLC25A4P12235 298 aa16.93■□□□□ 0.3
PTCD3-203ENST00000409783 PAX9P55771 341 aa16.93■□□□□ 0.3
PTCD3-203ENST00000409783 TMEM116Q8NCL8 245 aa16.93■□□□□ 0.3
PTCD3-203ENST00000409783 GPN1Q9HCN4 374 aaPredicted RBP16.93■□□□□ 0.3
PTCD3-203ENST00000409783 PALMDQ9NP74 551 aa16.93■□□□□ 0.3
PTCD3-203ENST00000409783 UFC1Q9Y3C8 167 aa16.93■□□□□ 0.3
PTCD3-203ENST00000409783 LY86O95711 162 aa16.92■□□□□ 0.3
PTCD3-203ENST00000409783 IGKV1-17P01599 117 aa16.92■□□□□ 0.3
PTCD3-203ENST00000409783 RND2P52198 227 aa16.92■□□□□ 0.3
PTCD3-203ENST00000409783 RELQ04864 619 aaPredicted RBP16.92■□□□□ 0.3
PTCD3-203ENST00000409783 DEFB114Q30KQ6 69 aa16.92■□□□□ 0.3
PTCD3-203ENST00000409783 GSKIPQ9P0R6 139 aa16.92■□□□□ 0.3
PTCD3-203ENST00000409783 RCL1Q9Y2P8 373 aaKnown RBP16.92■□□□□ 0.3
PTCD3-203ENST00000409783 IGHV3OR16-8A0A075B7F1 116 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 IZUMO1RA6ND01 250 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 PRSS46E5RG02 174 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 K7EMT4 169 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 MBPP02686 304 aaPredicted RBP16.91■□□□□ 0.3
PTCD3-203ENST00000409783 IFNA4P05014 189 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 IGLC1P0CG04 106 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 IL15RAQ13261 267 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 ETFRF1Q6IPR1 90 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 SLC16A13Q7RTY0 426 aa16.91■□□□□ 0.3
PTCD3-203ENST00000409783 FAM25EA8MYX2 175 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 SSSCA1O60232 199 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 GPX4P36969 197 aaPredicted RBP16.9■□□□□ 0.3
PTCD3-203ENST00000409783 CD300EQ496F6 205 aaPredicted RBP16.9■□□□□ 0.3
PTCD3-203ENST00000409783 TOMM20LQ6UXN7 152 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 OR2K2Q8NGT1 345 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 MRAPQ8TCY5 172 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 MARC2Q969Z3 335 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 SMIM8Q96KF7 97 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 C2orf50Q96LR7 162 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 ZFAND3Q9H8U3 227 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 DAZ1Q9NQZ3 744 aaKnown RBP16.9■□□□□ 0.3
PTCD3-203ENST00000409783 MRPL27Q9P0M9 148 aaKnown RBP16.9■□□□□ 0.3
PTCD3-203ENST00000409783 MLXQ9UH92 298 aa16.9■□□□□ 0.3
PTCD3-203ENST00000409783 C5orf51A6NDU8 294 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 H3BP45 60 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 SCGB1D2O95969 90 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 PTTG1O95997 202 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 GP9P14770 177 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 RAB11AP62491 216 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 TIGITQ495A1 244 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 SPANXN5Q5MJ07 72 aa16.89■□□□□ 0.29
PTCD3-203ENST00000409783 ZNF600Q6ZNG1 722 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms